RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 MAOBP27338 520 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 RYKP34925 604 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 XKP51811 444 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 HMGA2P52926 109 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 C21orf59P57076 290 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 VSX2P58304 361 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 TOP3AQ13472 1001 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 KEAP1Q14145 624 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 GPR19Q15760 415 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 TMEM107Q6UX40 140 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 TSEN54Q7Z6J9 526 aaKnown RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 ZNF761Q86XN6 746 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 NUP43Q8NFH3 380 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 GIPC3Q8TF64 312 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 TANKQ92844 425 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 TREX2Q9BQ50 279 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 SOX17Q9H6I2 414 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 SH3GLB1Q9Y371 365 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 LYVE1Q9Y5Y7 322 aa13.36□□□□□ -0.27
LIG3-205ENST00000585941 GPC6Q9Y625 555 aaPredicted RBP13.36□□□□□ -0.27
LIG3-205ENST00000585941 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 EML5Q05BV3 1969 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 PRAMEF10O60809 474 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 FESP07332 822 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 C8orf89P0DMQ9 161 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ANXA8P13928 327 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ST6GAL1P15907 406 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 CD247P20963 164 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 KCNJ5P48544 419 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 DAPP51397 102 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 AFF3P51826 1226 aaKnown RBP13.35□□□□□ -0.27
LIG3-205ENST00000585941 MAPK10P53779 464 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 PRKAG1P54619 331 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 EPHA4P54764 986 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 SPIBQ01892 262 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 LASP1Q14847 261 aaKnown RBP13.35□□□□□ -0.27
LIG3-205ENST00000585941 ATAD3BQ5T9A4 648 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 BORAQ6PGQ7 559 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 SMYD1Q8NB12 490 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 OR9A2Q8NGT5 310 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 HDAC2Q92769 488 aaKnown RBP13.35□□□□□ -0.27
LIG3-205ENST00000585941 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 MS4A4EQ96PG1 132 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 PSD2Q9BQI7 771 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ACTRT3Q9BYD9 372 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 CHRNA10Q9GZZ6 450 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 RAB33BQ9H082 229 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 ANKHQ9HCJ1 492 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 TP53BP1Q12888 1972 aaPredicted RBP13.35□□□□□ -0.27
LIG3-205ENST00000585941 ABCA7Q8IZY2 2146 aa13.35□□□□□ -0.27
LIG3-205ENST00000585941 TRIOO75962 3097 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 CCDC163A0A0D9SF12 145 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 BLACEA4D250 179 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 ARRDC5A6NEK1 342 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 K7ESF4 209 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 BCKDKO14874 412 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 CPMP14384 443 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 PORP16435 677 aaPredicted RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 HOXA6P31267 233 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 MC3RP41968 323 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 OR1E2P47887 323 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 SMIM11AP58511 58 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 DUSP2Q05923 314 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 MAPK11Q15759 364 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 NDUFA9Q16795 377 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 DUSP7Q16829 419 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 ZNF750Q32MQ0 723 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 C14orf28Q4W4Y0 310 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 ZNF691Q5VV52 312 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 FOXB2Q5VYV0 432 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 ZNF438Q7Z4V0 828 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 SATL1Q86VE3 508 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 MCATQ8IVS2 390 aaKnown RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 APOBEC4Q8WW27 367 aaKnown RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 COL21A1Q96P44 957 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 CD180Q99467 661 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 TRIM45Q9H8W5 580 aaPredicted RBP13.34□□□□□ -0.27
LIG3-205ENST00000585941 ERVMER34-1Q9H9K5 563 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 EPHA6Q9UF33 1036 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 NAALAD2Q9Y3Q0 740 aa13.34□□□□□ -0.27
LIG3-205ENST00000585941 TESMINQ9Y4I5 508 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms