RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 PGRMC2O15173 223 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 SEC22BO75396 215 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 RASAL1O95294 804 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 WISP1O95388 367 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 NT5EP21589 574 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 NTSP30990 170 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 MPIP34949 423 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ALDH9A1P49189 494 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 HK2P52789 917 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 DCAF7P61962 342 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ERVK-8P63133 956 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ID2Q02363 134 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 BTKQ06187 659 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 BST1Q10588 318 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 STX3Q13277 289 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 OR1C1Q15619 314 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 FAM71E1Q6IPT2 247 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 Q6ZSR9 355 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 R3HCC1LQ7Z5L2 792 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 OR4N5Q8IXE1 308 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 DDIASQ8IXT1 998 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 VWA5B2Q8N398 1253 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ASB15Q8WXK1 588 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 SORT1Q99523 831 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 NPAS2Q99743 824 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 TIMMDC1Q9NPL8 285 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 SLC35C2Q9NQQ7 365 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 PRODH2Q9UF12 536 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ZDHHC2Q9UIJ5 367 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 ERVK-19Q9WJR5 959 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 GLOD5A6NK44 160 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 A8MVJ9 347 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 KLF11O14901 512 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 PIP5K1BO14986 540 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 PRKRAO75569 313 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 PRPS2P11908 318 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 CD96P40200 585 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 SLC1A6P48664 564 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 SLC37A1P57057 533 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 RPL38P63173 70 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF267Q14586 743 aaPredicted RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 EBPQ15125 230 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 PRICKLE4Q2TBC4 344 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 SLC25A25Q6KCM7 469 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 CTHRC1Q96CG8 243 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 SNRNP40Q96DI7 357 aaKnown RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 CNRIP1Q96F85 164 aaPredicted RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF681Q96N22 645 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 RASL10BQ96S79 203 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 TUBB1Q9H4B7 451 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 THAP1Q9NVV9 213 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ASIC5Q9NY37 505 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 PLA2G3Q9NZ20 509 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF462Q96JM2 2506 aa12.82□□□□□ -0.36
PRKCSH-202ENST00000585540 ASPDHA6ND91 283 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 TTC36A6NLP5 189 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 COQ9O75208 318 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 SLC25A12O75746 678 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 NEURL1O76050 574 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 SP1P08047 785 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 EDN3P14138 238 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 RPL14P50914 215 aaKnown RBP12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 NRG3P56975 720 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 RPP38P78345 283 aaKnown RBP12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 C2orf80Q0P641 193 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 PIGGQ5H8A4 983 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 FCRLBQ6BAA4 426 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 BNC2Q6ZN30 1099 aaPredicted RBP12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 OR2T11Q8NH01 316 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 ZFP28Q8NHY6 868 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 FAR1Q8WVX9 515 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 EBPLQ9BY08 206 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 OR10A5Q9H207 317 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 MAT2BQ9NZL9 334 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF639Q9UID6 485 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
PRKCSH-202ENST00000585540 A0A087WV62 115 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 C2orf92A0A1B0GVN3 265 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ACOX3O15254 700 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ATP8B1O43520 1251 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 NME2P1O60361 137 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 SNNO75324 88 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms