RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 DZIP1Q86YF9 867 aaKnown RBP2.79□□□□□ -1.96
COPS3-217ENST00000583160 ZNF525Q8N782 197 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 RNF149Q8NC42 400 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 CCDC191Q8NCU4 936 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 SAP25Q8TEE9 199 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 EXOC4Q96A65 974 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 SGF29Q96ES7 293 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 MAPKAP1Q9BPZ7 522 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 MINDY3Q9H8M7 445 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 CHCHD3Q9NX63 227 aaKnown RBP2.79□□□□□ -1.96
COPS3-217ENST00000583160 VNN3Q9NY84 501 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 TTLL3Q9Y4R7 772 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 RGPD3A6NKT7 1758 aaPredicted RBP2.79□□□□□ -1.96
COPS3-217ENST00000583160 COL14A1Q05707 1796 aaKnown RBP2.79□□□□□ -1.96
COPS3-217ENST00000583160 RGPD4Q7Z3J3 1758 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 RGPD1P0DJD0 1748 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 TOPAZ1Q8N9V7 1692 aa2.79□□□□□ -1.96
COPS3-217ENST00000583160 TULP4Q9NRJ4 1543 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 BCL9O00512 1426 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 DHX57Q6P158 1386 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 PLEKHH1Q9ULM0 1364 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 PFASO15067 1338 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 ILVBLA1L0T0 632 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 CLN5O75503 358 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 GPX3P22352 226 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 MDH2P40926 338 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 CAPZA1P52907 286 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 FKBP1BP68106 108 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 GSTO1P78417 241 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 HERC4Q5GLZ8 1057 aaPredicted RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 Q8NFD4 153 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 TBCKQ8TEA7 893 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 CNDP2Q96KP4 475 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 ERGIC2Q96RQ1 377 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 ZNF446Q9NWS9 450 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 ZNF319Q9P2F9 582 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 EXOC6BQ9Y2D4 811 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 TMED7Q9Y3B3 224 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 ETV7Q9Y603 341 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 ARHGEF28Q8N1W1 1705 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 TNS1Q9HBL0 1735 aaKnown RBP2.78□□□□□ -1.96
COPS3-217ENST00000583160 LMO7Q8WWI1 1683 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 RREB1Q92766 1687 aa2.78□□□□□ -1.96
COPS3-217ENST00000583160 RAI1Q7Z5J4 1906 aaPredicted RBP2.78□□□□□ -1.97
COPS3-217ENST00000583160 ATP7BP35670 1465 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 CPDO75976 1380 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 PARD3Q8TEW0 1356 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 USP54Q70EL1 1684 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 HTR3EA5X5Y0 456 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 TNFSF11O14788 317 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 MCF2LO15068 1137 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 SELENOFO60613 162 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 PDGFBP01127 241 aaPredicted RBP2.77□□□□□ -1.97
COPS3-217ENST00000583160 TNFRSF4P43489 277 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 NPBWR1P48145 328 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 FNTAP49354 379 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 ZNF41P51814 821 aaPredicted RBP2.77□□□□□ -1.97
COPS3-217ENST00000583160 FOLH1Q04609 750 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 SLC17A1Q14916 467 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 PM20D1Q6GTS8 502 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 ALKBH5Q6P6C2 394 aaKnown RBP2.77□□□□□ -1.97
COPS3-217ENST00000583160 SIPA1Q96FS4 1042 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 PAXXQ9BUH6 204 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 ZNF665Q9H7R5 613 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 RCOR3Q9P2K3 495 aaPredicted RBP2.77□□□□□ -1.97
COPS3-217ENST00000583160 RNF24Q9Y225 148 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 SBF2Q86WG5 1849 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 COL18A1P39060 1754 aa2.77□□□□□ -1.97
COPS3-217ENST00000583160 SSH2Q76I76 1423 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 PEAK1Q9H792 1746 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 PARP4Q9UKK3 1724 aaKnown RBP2.76□□□□□ -1.97
COPS3-217ENST00000583160 PHRF1Q9P1Y6 1649 aaKnown RBP2.76□□□□□ -1.97
COPS3-217ENST00000583160 M0R296 226 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 OR6A2O95222 327 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 LDHCP07864 332 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 FOSL2P15408 326 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 GJB2P29033 226 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 PRKCIP41743 596 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 CNPY1Q3B7I2 92 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 IQCCQ4KMZ1 466 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
COPS3-217ENST00000583160 ABRAXAS1Q6UWZ7 409 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 SPATA19Q7Z5L4 167 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 C4orf19Q8IY42 314 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 ZNF491Q8N8L2 437 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 RAB3IPQ96QF0 476 aaPredicted RBP2.76□□□□□ -1.97
COPS3-217ENST00000583160 AMBNQ9NP70 447 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 ANAPC5Q9UJX4 755 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 ABCC6O95255 1503 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 COL24A1Q17RW2 1714 aa2.76□□□□□ -1.97
COPS3-217ENST00000583160 RAB3GAP2Q9H2M9 1393 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 SLIT3O75094 1523 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 DUSP11O75319 330 aaKnown RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 ZFYP08048 801 aaPredicted RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 FCGR3AP08637 254 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 CCDC159P0C7I6 412 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 ODC1P11926 461 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 HSD17B1P14061 328 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms