RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 FLYWCH1Q4VC44 716 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 PYDC2Q56P42 97 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 SYT14P1Q58G82 188 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 KHDRBS2Q5VWX1 349 aaKnown RBP12.97□□□□□ -0.33
RNF43-205ENST00000581868 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 NANOGNBQ7Z5D8 188 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 ASCC1Q8N9N2 400 aaKnown RBP12.97□□□□□ -0.33
RNF43-205ENST00000581868 ANKRD53Q8N9V6 530 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 GATAD2BQ8WXI9 593 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 SMPDL3AQ92484 453 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 FNDC11Q9BVV2 318 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 RACGAP1Q9H0H5 632 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
RNF43-205ENST00000581868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
RNF43-205ENST00000581868 TDP1Q9NUW8 608 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 CUEDC1Q9NWM3 386 aaPredicted RBP12.97□□□□□ -0.33
RNF43-205ENST00000581868 NUFIP1Q9UHK0 495 aaKnown RBP12.97□□□□□ -0.33
RNF43-205ENST00000581868 TMEM98Q9Y2Y6 226 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 HCFC2Q9Y5Z7 792 aa12.97□□□□□ -0.33
RNF43-205ENST00000581868 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 RAB36O95755 333 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 EPHX1P07099 455 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 NR2F1P10589 423 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 MMP11P24347 488 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 DDOSTP39656 456 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SNAPC1Q16533 368 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 OCLNQ16625 522 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 C11orf96Q7Z7L8 435 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 FAM129CQ86XR2 697 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 UBASH3BQ8TF42 649 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 GPA33Q99795 319 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 YIPF4Q9BSR8 244 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 ZNF717Q9BY31 904 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 SLC22A4Q9H015 551 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 PLEKHB1Q9UF11 243 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 A4GNTQ9UNA3 340 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SNX7Q9UNH6 387 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 PCYT1BQ9Y5K3 369 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 ANKRD34BA5PLL1 514 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 CXCL14O95715 111 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SERPIND1P05546 499 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 CSF3P09919 207 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 BSGP35613 385 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 GIPRP48546 466 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 PRKAG1P54619 331 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 CCDC149Q6ZUS6 474 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SHFQ7M4L6 423 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 NRSN1Q8IZ57 195 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 OR4K5Q8NGD3 323 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 COQ10AQ96MF6 247 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 FYTTD1Q96QD9 318 aaKnown RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 TM9SF2Q99805 663 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 ZCCHC2Q9C0B9 1178 aaKnown RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 RMI1Q9H9A7 625 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 TEX10Q9NXF1 929 aaPredicted RBP12.96□□□□□ -0.33
RNF43-205ENST00000581868 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.33
RNF43-205ENST00000581868 SLC35F4A4IF30 521 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 HMX3A6NHT5 357 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 H7BY64 318 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
RNF43-205ENST00000581868 MYL12AP19105 171 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 PSMB5P28074 263 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 ACADLP28330 430 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 GPC1P35052 558 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 SMIM11AP58511 58 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 CRTC2Q53ET0 693 aaPredicted RBP12.95□□□□□ -0.34
RNF43-205ENST00000581868 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
RNF43-205ENST00000581868 C17orf64Q86WR6 236 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 NUS1Q96E22 293 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 PRAP1Q96NZ9 151 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 NEUROD4Q9HD90 331 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 DIMT1Q9UNQ2 313 aaKnown RBP12.95□□□□□ -0.34
RNF43-205ENST00000581868 DENND4CQ5VZ89 1909 aa12.95□□□□□ -0.34
RNF43-205ENST00000581868 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms