RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DUSP8Q13202 625 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 DDX39BQ13838 428 aaKnown RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 EBPQ15125 230 aaKnown RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 FBXL19-AS1Q494R0 122 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 TMEM198Q66K66 360 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 CMC1Q7Z7K0 106 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 ZZZ3Q8IYH5 903 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 CENPLQ8N0S6 344 aaPredicted RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 TAGAPQ8N103 731 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 PPM1NQ8N819 430 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 ZNF441Q8N8Z8 693 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 DOK4Q8TEW6 326 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 NXNL1Q96CM4 212 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 REPS1Q96D71 796 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 GAL3ST4Q96RP7 486 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 SECISBP2Q96T21 854 aaKnown RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 TIMP4Q99727 224 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 DOHHQ9BU89 302 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 POLDIP3Q9BY77 421 aaKnown RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 SLC6A15Q9H2J7 730 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 DPH5Q9H2P9 285 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 ACTR8Q9H981 624 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 LYARQ9NX58 379 aaKnown RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 ZNF629Q9UEG4 869 aaPredicted RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 FREM3P0C091 2139 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 C2orf92A0A1B0GVN3 265 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 GLOD5A6NK44 160 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 FOXE1O00358 373 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 TP53I11O14683 189 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 TMPRSS11DO60235 418 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 EEDO75530 441 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 PRKRAO75569 313 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 SNX4O95219 450 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 HPNP05981 417 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 FAM58BPP0C7Q3 252 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 NR2F6P10588 404 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 DNASE1P24855 282 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 UQCRC1P31930 480 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 TRPC1P48995 793 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 ALDH18A1P54886 795 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 CAV1Q03135 178 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CRYZQ08257 329 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 FUT7Q11130 342 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 NAB1Q13506 487 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 SNTB1Q13884 538 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 DAZAP2Q15038 168 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 SETDB1Q15047 1291 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 PCBP2Q15366 365 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFFL-209ENST00000581265 SF3B4Q15427 424 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFFL-209ENST00000581265 PFKFB4Q16877 469 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 FNDC7Q5VTL7 733 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 VASNQ6EMK4 673 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 METTL2BQ6P1Q9 378 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 POMZP3Q6PJE2 187 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CYP20A1Q6UW02 462 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CLEC9AQ6UXN8 241 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CXXC5Q7LFL8 322 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 MYLK4Q86YV6 388 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 LACC1Q8IV20 430 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 LIX1Q8N485 282 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 L3MBTL4Q8NA19 623 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 RELL2Q8NC24 303 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 TNIP2Q8NFZ5 429 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 WDR20Q8TBZ3 569 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 FAM222BQ8WU58 562 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 DIO2Q92813 273 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 RNASE6Q93091 150 aaKnown RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 NTNG2Q96CW9 530 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 JSRP1Q96MG2 331 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 SH3GL2Q99962 352 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 ANGPTL4Q9BY76 406 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CLEC4MQ9H2X3 399 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 UBQLN3Q9H347 655 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 LIME1Q9H400 295 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 WDR41Q9HAD4 459 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CXorf21Q9HAI6 301 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 CRIM1Q9NZV1 1036 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 ST6GALNAC2Q9UJ37 374 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 FOXD3Q9UJU5 478 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 RPH3AQ9Y2J0 694 aaPredicted RBP9.72□□□□□ -0.85
RFFL-209ENST00000581265 NPFFR2Q9Y5X5 522 aa9.72□□□□□ -0.85
RFFL-209ENST00000581265 C15orf38-AP3S2A0A0A6YYH1 394 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 HMX2A2RU54 273 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 DVL2O14641 736 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 PGRMC2O15173 223 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 RAD51CO43502 376 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 AIFM1O95831 613 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 C2P06681 752 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 BMP5P22003 454 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 GDF1P27539 372 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 SSTR4P31391 388 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 STX2P32856 288 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 MAGEA4P43358 317 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ASCL1P50553 236 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 CDK9P50750 372 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms