RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 LYPD8Q6UX82 237 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 ISCA2Q86U28 154 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 CREG2Q8IUH2 290 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 TEX9Q8N6V9 391 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 MTERF1Q99551 399 aaKnown RBP16.43■□□□□ 0.22
MKS1-209ENST00000580127 TIMP4Q99727 224 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 ACTR8Q9H981 624 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 SMYD2Q9NRG4 433 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 PSD3Q9NYI0 1048 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 CNOT11Q9UKZ1 510 aaKnown RBP16.43■□□□□ 0.22
MKS1-209ENST00000580127 IKBKGQ9Y6K9 419 aa16.43■□□□□ 0.22
MKS1-209ENST00000580127 LRRC3CA6NJW4 275 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 KERAO60938 352 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 TRIM3O75382 744 aaPredicted RBP16.42■□□□□ 0.22
MKS1-209ENST00000580127 PIAS1O75925 651 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 ACSL3O95573 720 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 RAF1P04049 648 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 FAM58BPP0C7Q3 252 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 NR2F6P10588 404 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 PIK3R1P27986 724 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 CUL3Q13618 768 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 SNTB1Q13884 538 aaKnown RBP16.42■□□□□ 0.22
MKS1-209ENST00000580127 RCAN2Q14206 197 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 RPS6KA2Q15349 733 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 ACSF3Q4G176 576 aaPredicted RBP16.42■□□□□ 0.22
MKS1-209ENST00000580127 C18orf63Q68DL7 685 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 TNIP2Q8NFZ5 429 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 UBTD2Q8WUN7 234 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 SORBS1Q9BX66 1292 aaKnown RBP16.42■□□□□ 0.22
MKS1-209ENST00000580127 LIME1Q9H400 295 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 CALHM2Q9HA72 323 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 PROK2Q9HC23 129 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 WHRNQ9P202 907 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 CAMK2AQ9UQM7 478 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 ACOT9Q9Y305 439 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 NPFFR2Q9Y5X5 522 aa16.42■□□□□ 0.22
MKS1-209ENST00000580127 ACANP16112 2415 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 TCRBV9S1A1TA0A576 114 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 FAM159BA6NKW6 160 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 CXorf49A8MYA2 514 aaPredicted RBP16.41■□□□□ 0.22
MKS1-209ENST00000580127 HRKO00198 91 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 PLPP1O14494 284 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 UGDHO60701 494 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 HPNP05981 417 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 DRD2P14416 443 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 CTSSP25774 331 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 PIK3CGP48736 1102 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 GNG11P61952 73 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 SLMAPQ14BN4 828 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 EBPQ15125 230 aaKnown RBP16.41■□□□□ 0.22
MKS1-209ENST00000580127 FAM83EQ2M2I3 478 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 NSUN5P2Q63ZY6 315 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 VASNQ6EMK4 673 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 SCIMPQ6UWF3 145 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 DGAT2L6Q6ZPD8 337 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 DTNBP1Q96EV8 351 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 RILPQ96NA2 401 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 SH3GL2Q99962 352 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 ANGPTL4Q9BY76 406 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 EPB41L4BQ9H329 900 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 DDX31Q9H8H2 851 aaKnown RBP16.41■□□□□ 0.22
MKS1-209ENST00000580127 DMRT3Q9NQL9 472 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 AHSPQ9NZD4 102 aa16.41■□□□□ 0.22
MKS1-209ENST00000580127 TNPO3Q9Y5L0 923 aaKnown RBP16.41■□□□□ 0.22
MKS1-209ENST00000580127 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 CD8B2A6NJW9 211 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 GLOD5A6NK44 160 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 H0YIV9 168 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 UBXN8O00124 270 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 TP73O15350 636 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 IL18BPO95998 194 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 GFAPP14136 432 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 CDK9P50750 372 aaKnown RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 HNRNPH2P55795 449 aaKnown RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 RPS13P62277 151 aaKnown RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 EEF1A1P68104 462 aaKnown RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 CRYZQ08257 329 aaKnown RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 FOXD4Q12950 439 aaPredicted RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 EEF1A1P5Q5VTE0 462 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 OR52E8Q6IFG1 317 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 SEM1Q6ZVN7 128 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 NUDT13Q86X67 352 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 GALNT12Q8IXK2 581 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 PPM1NQ8N819 430 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 RELL2Q8NC24 303 aaPredicted RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 OR7G1Q8NGA0 311 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 RHEBL1Q8TAI7 183 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 SPPL2AQ8TCT8 520 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 ABTB1Q969K4 478 aaPredicted RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 NAPGQ99747 312 aaPredicted RBP16.4■□□□□ 0.22
MKS1-209ENST00000580127 ERP44Q9BS26 406 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 YIPF4Q9BSR8 244 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 PRDM14Q9GZV8 571 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 NEUROD4Q9HD90 331 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 CBLCQ9ULV8 474 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 CFL2Q9Y281 166 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 ASB4Q9Y574 426 aa16.4■□□□□ 0.22
MKS1-209ENST00000580127 NCKAP5O14513 1909 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms