RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PPCDCQ96CD2 204 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CTHRC1Q96CG8 243 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CMTM5Q96DZ9 223 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MARK4Q96L34 752 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZBTB18Q99592 522 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 TUBB6Q9BUF5 446 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SLC25A23Q9BV35 468 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 DUSP26Q9BV47 211 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 VN1R1Q9GZP7 353 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MIEF1Q9NQG6 463 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PRTFDC1Q9NRG1 225 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NTMQ9P121 344 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CTSFQ9UBX1 484 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 UTS2RQ9UKP6 389 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PPIEQ9UNP9 301 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 FARSAQ9Y285 508 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CAPN7Q9Y6W3 813 aa10.43□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 BBIP1A8MTZ0 92 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 C9J4A7 227 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PLOD2O00469 737 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CFLARO15519 480 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 AKAP10O43572 662 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 FGF17O60258 216 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 AGFG2O95081 481 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 LRATO95237 230 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 IGHEP01854 428 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZCCHC18P0CG32 403 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 COX7A2P14406 83 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CD1EP15812 388 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PORP16435 677 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CSNK2A2P19784 350 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 TCN2P20062 427 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PTPN4P29074 926 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 S100A3P33764 101 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SOX18P35713 384 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 XKP51811 444 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 EFNA3P52797 238 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 BTG2P78543 158 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 FOLH1Q04609 750 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MAP4K2Q12851 820 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 STX5Q13190 355 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ERV3-1Q14264 604 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SSPNQ14714 243 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SPRED3Q2MJR0 410 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 FAM174BQ3ZCQ3 159 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CRTC2Q53ET0 693 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SPANXN4Q5MJ08 99 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 FOXR1Q6PIV2 292 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ST13P4Q8IZP2 240 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 METTL27Q8N6F8 245 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CLHC1Q8NHS4 586 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NUDT8Q8WV74 236 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 OR5P2Q8WZ92 322 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GTF2H4Q92759 462 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GFM2Q969S9 779 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ERP27Q96DN0 273 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZBED6CLQ96FA7 236 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CCDC115Q96NT0 180 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 AMDHD1Q96NU7 426 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PELOQ9BRX2 385 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ALOXE3Q9BYJ1 711 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SERHLQ9NQF3 203 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NECTIN3Q9NQS3 549 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SEMA3GQ9NS98 782 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SH3BP4Q9P0V3 963 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ARMCX1Q9P291 453 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MAP10Q9P2G4 905 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GPN3Q9UHW5 284 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZNF639Q9UID6 485 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 KCND3Q9UK17 655 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 G3BP2Q9UN86 482 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ERVK-11Q9UQG0 969 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ZNF780BQ9Y6R6 833 aa10.42□□□□□ -0.74
CDK5RAP3-204ENST00000577664 NUP210LQ5VU65 1888 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 SPG11Q96JI7 2443 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 ASPDHA6ND91 283 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 WIPF3A6NGB9 483 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CCDC154A6NI56 674 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 GLOD5A6NK44 160 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 IDSB3KWA1 339 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 B4GALT2O60909 372 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 LDB3O75112 727 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 JRKO75564 520 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PRKRAO75569 313 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 UMODP07911 640 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 T-ENOLP0DO92 83 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CPMP14384 443 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 HOXB9P17482 250 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 CAPN3P20807 821 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 PTPN6P29350 595 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 STT3AP46977 705 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 TRPC1P48995 793 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 EMP2P54851 167 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 KCNK10P57789 538 aa10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 RPS15P62841 145 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-204ENST00000577664 MGAT2Q10469 447 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms