RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PPM1NQ8N819 430 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-208ENST00000575261 DIO2Q92813 273 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 RNASE6Q93091 150 aaKnown RBP9.59□□□□□ -0.87
TVP23B-208ENST00000575261 HSPBAP1Q96EW2 488 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 POM121Q96HA1 1249 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 SH3GL2Q99962 352 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 ERP44Q9BS26 406 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 ZNF717Q9BY31 904 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-208ENST00000575261 ACTR8Q9H981 624 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 SNX15Q9NRS6 342 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 RASSF1Q9NS23 344 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
TVP23B-208ENST00000575261 MTRF1LQ9UGC7 380 aaKnown RBP9.59□□□□□ -0.87
TVP23B-208ENST00000575261 FOXD3Q9UJU5 478 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-208ENST00000575261 C2orf92A0A1B0GVN3 265 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 CCDC189A1A4V9 331 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GLOD5A6NK44 160 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 A6NNC1 897 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 AHRRA9YTQ3 701 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 H0YIV9 168 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SYT5O00445 386 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 TMPRSS11DO60235 418 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 TRIM3O75382 744 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 EEDO75530 441 aaKnown RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 FAM155BO75949 473 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 AIFM1O95831 613 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 CLPSP04118 112 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 FAM58BPP0C7Q3 252 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SLC35E2P0CK97 266 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 MTHFD2P13995 350 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GFAPP14136 432 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 DNASE1P24855 282 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 PIK3CGP48736 1102 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 MASP1P48740 699 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GPX6P59796 221 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 MRPS25P82663 173 aaKnown RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 CRYZQ08257 329 aaKnown RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 CUL3Q13618 768 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SETDB1Q15047 1291 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SF3B4Q15427 424 aaKnown RBP eCLIP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 FAM83EQ2M2I3 478 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 FBXL19-AS1Q494R0 122 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 C6orf163Q5TEZ5 329 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 HLA-DQA1Q5Y7H0 255 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 TMEM198Q66K66 360 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 OR52E8Q6IFG1 317 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SEM1Q6ZVN7 128 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GALNT12Q8IXK2 581 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 ZNF441Q8N8Z8 693 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 NAXEQ8NCW5 288 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GOT1L1Q8NHS2 421 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 RHEBL1Q8TAI7 183 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 DOK4Q8TEW6 326 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 FAM222BQ8WU58 562 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 RILPQ96NA2 401 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 ALPK1Q96QP1 1244 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 SECISBP2Q96T21 854 aaKnown RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 DDX31Q9H8H2 851 aaKnown RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 GRHL1Q9NZI5 618 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 ZNF629Q9UEG4 869 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-208ENST00000575261 ACOT9Q9Y305 439 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 ASB4Q9Y574 426 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 IKBKGQ9Y6K9 419 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 NAV3Q8IVL0 2385 aa9.58□□□□□ -0.88
TVP23B-208ENST00000575261 EXPH5Q8NEV8 1989 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 NINQ8N4C6 2090 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 A0A087X1B8 175 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 A0A1W2PR48 441 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 RAD51CO43502 376 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 TRAPPC6AO75865 159 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 SEMA3DO95025 777 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 SNX4O95219 450 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 EPPINO95925 133 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 IL2RAP01589 272 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 HPNP05981 417 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 KLK2P20151 261 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 TACR1P25103 407 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 PIK3R1P27986 724 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 SSTR4P31391 388 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CEACAM8P31997 349 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 BSGP35613 385 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 TIMP3P35625 211 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CDK9P50750 372 aaKnown RBP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 ALDH18A1P54886 795 aaKnown RBP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 NRG3P56975 720 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 FBXW4P57775 412 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 RPP38P78345 283 aaKnown RBP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CPSF6Q16630 551 aaKnown RBP eCLIP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 PFKFB4Q16877 469 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 FBXW10Q5XX13 1052 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 PACS2Q86VP3 889 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CCDC25Q86WR0 208 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CDC20BQ86Y33 519 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 CENPLQ8N0S6 344 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-208ENST00000575261 TNIP2Q8NFZ5 429 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 SPPL2AQ8TCT8 520 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 KCTD4Q8WVF5 259 aa9.57□□□□□ -0.88
TVP23B-208ENST00000575261 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms