RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZNF888P0CJ79 500 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 F3P13726 295 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 LTB4RQ15722 352 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF542PQ5EBM4 170 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 SLC48A1Q6P1K1 146 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 KLHL17Q6TDP4 642 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 SLC44A3Q8N4M1 653 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 C6orf106Q9H6K1 298 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 ENPP5Q9UJA9 477 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 PSME2Q9UL46 239 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 M0R3H8 397 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 P2RX6O15547 441 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 CTSVO60911 334 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 DNAJB6O75190 326 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 BCAS1O75363 584 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 APBB3O95704 486 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 CHRM4P08173 479 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 POLR2CP19387 275 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 MLLT10P55197 1068 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF770Q6IQ21 691 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 FBXO42Q6P3S6 717 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 P3H2Q8IVL5 708 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 TBC1D19Q8N5T2 526 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 ZCCHC10Q8TBK6 192 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 QRSL1Q9H0R6 528 aaKnown RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 GPN2Q9H9Y4 310 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF556Q9HAH1 456 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 EQTNQ9NQ60 294 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 TMEM74BQ9NUR3 256 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 PCOLCE2Q9UKZ9 415 aa22.32■■□□□ 1.16
NPLOC4-217ENST00000574897 PROM1O43490 865 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 LCKP06239 509 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 PSMB9P28065 219 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 DCTN2Q13561 401 aaKnown RBP22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 GPR18Q14330 331 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 Q6ZSR6 202 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 WDR53Q7Z5U6 358 aaPredicted RBP22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 OR13H1Q8NG92 308 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 OR9A2Q8NGT5 310 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 OR2A14Q96R47 310 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 SIGLEC11Q96RL6 698 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 ACOT13Q9NPJ3 140 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 A0A0J9YVX5 310 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 KDM1AO60341 852 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 ACVR2AP27037 513 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 ALDH4A1P30038 563 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 C21orf33P30042 268 aaPredicted RBP22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 MC3RP41968 323 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 PXNP49023 591 aaPredicted RBP22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 CTF1Q16619 201 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 COLEC12Q5KU26 742 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 RHOXF1Q8NHV9 184 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF354BQ96LW1 612 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 ENTPD4Q9Y227 616 aa22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 GPC6Q9Y625 555 aaPredicted RBP22.31■■□□□ 1.16
NPLOC4-217ENST00000574897 GSAPA4D1B5 854 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 PDE9AO76083 593 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 EPPINO95925 133 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 CELA2BP08218 269 aaPredicted RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 IGFBP1P08833 259 aaPredicted RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 STXBP1P61764 594 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 LSM3P62310 102 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 PTGES3Q15185 160 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 SLC22A18ASQ8N1D0 253 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 KAT2AQ92830 837 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF607Q96SK3 696 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 LRRC72A6NJI9 287 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 UGT2B7P16662 529 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 ELAVL4P26378 380 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 NDUFS1P28331 727 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 PIN1Q13526 163 aaPredicted RBP22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 Q6ZS52 159 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 ASPGQ86U10 573 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF576Q9H609 170 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 SEMA3GQ9NS98 782 aa22.3■■□□□ 1.16
NPLOC4-217ENST00000574897 OR6C74A6NCV1 312 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 TPST2O60704 377 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 BCL10O95999 233 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 GABRB1P18505 474 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 POU1F1P28069 291 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 PRSS48Q7RTY5 328 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 ANKRD13BQ86YJ7 626 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 ZNF681Q96N22 645 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 CTPS2Q9NRF8 586 aa22.29■■□□□ 1.16
NPLOC4-217ENST00000574897 TMEM247A6NEH6 219 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 SEMA4FO95754 770 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 PVRP15151 417 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 CSNK2A2P19784 350 aaPredicted RBP22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 CHMP24386 653 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 KHKP50053 298 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 CCINQ13939 588 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 LSRQ86X29 649 aaPredicted RBP22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 COPS4Q9BT78 406 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 MMP17Q9ULZ9 603 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 NDRG2Q9UN36 371 aaKnown RBP22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 OR2A25A4D2G3 310 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 GUCY1B2O75343 617 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 RPS15AP62244 130 aaKnown RBP22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 OCA2Q04671 838 aa22.28■■□□□ 1.16
NPLOC4-217ENST00000574897 EOGTQ5NDL2 527 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms