RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZER1Q7Z7L7 766 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 NRSN1Q8IZ57 195 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SETD7Q8WTS6 366 aaKnown RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SMPDL3AQ92484 453 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 UCN3Q969E3 161 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 DIRAS2Q96HU8 199 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 LRR1Q96L50 414 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 GPA33Q99795 319 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 TREX2Q9BQ50 279 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 POLDIP3Q9BY77 421 aaKnown RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 ZDHHC5Q9C0B5 715 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SLC22A4Q9H015 551 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 DKK3Q9UBP4 350 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SLC28A2O43868 658 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 PDE9AO76083 593 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 RAB36O95755 333 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 LGI1O95970 557 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 TLE2Q04725 743 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 EXOSC8Q96B26 276 aaKnown RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 VWCEQ96DN2 955 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 COQ10AQ96MF6 247 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 ZNF582Q96NG8 517 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 DEPDC7Q96QD5 511 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 GDF15Q99988 308 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 AHSPQ9NZD4 102 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SNX7Q9UNH6 387 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 SPINT1O43278 529 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 GUCY1B2O75343 617 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 SDC2P34741 201 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 NNMTP40261 264 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 PCBP4P57723 403 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 OR2G6Q5TZ20 316 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 KHDRBS2Q5VWX1 349 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 PRR23CQ6ZRP0 262 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 HMGN2P46Q86SG4 172 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 CLDN22Q8N7P3 220 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 ANKRD53Q8N9V6 530 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 SLC7A6Q92536 515 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 RNF170Q96K19 258 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 TMEM246Q9BRR3 403 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 NUFIP1Q9UHK0 495 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 NUP210Q8TEM1 1887 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 A0A0B4J293 547 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 KPNA3O00505 521 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 SCO2O43819 266 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 TMCC2O75069 709 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 POP7O75817 140 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 CSF2P04141 144 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 OR12D1P0DN82 309 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 SSTR4P31391 388 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 GIPRP48546 466 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 GAS1P54826 345 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 RPS25P62851 125 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 BNC1Q01954 994 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 CNTN1Q12860 1018 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 RDH10Q8IZV5 341 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 KRT78Q8N1N4 520 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 UBE2J2Q8N2K1 259 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 SYT14Q8NB59 555 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 OR5AR1Q8NGP9 310 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 TM9SF4Q92544 642 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 FGF11Q92914 225 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 RNF31Q96EP0 1072 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 FYTTD1Q96QD9 318 aaKnown RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 ZNF607Q96SK3 696 aa18.04■□□□□ 0.48
SCARF1-206ENST00000573852 RANGRFQ9HD47 186 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 PAQR5Q9NXK6 330 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-206ENST00000573852 CCDC182A6NF36 153 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 B4DXG7 233 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 DDX5P17844 614 aaKnown RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 ALDH6A1Q02252 535 aaKnown RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 KIAA0907Q7Z7F0 614 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 OR5D16Q8NGK9 328 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 NEUROD4Q9HD90 331 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 MAN2C1Q9NTJ4 1040 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 TBC1D14Q9P2M4 693 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 PRKAB1Q9Y478 270 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 PCYT1BQ9Y5K3 369 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 EPHX1P07099 455 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 CCT3P49368 545 aaKnown RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 SMIM11AP58511 58 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 DEFB103AP81534 67 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 EFNB1P98172 346 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 HOXC5Q00444 222 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 SLC35F1Q5T1Q4 408 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 PDZK1Q5T2W1 519 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 LILRA6Q6PI73 481 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 LCTLQ6UWM7 567 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 MEX3DQ86XN8 651 aaKnown RBP18.03■□□□□ 0.48
SCARF1-206ENST00000573852 TBC1D19Q8N5T2 526 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 OR4K5Q8NGD3 323 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 BEX2Q9BXY8 128 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 MS4A8Q9BY19 250 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 KCNK12Q9HB15 430 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 LHX9Q9NQ69 397 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 ZSCAN32Q9NX65 697 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 SAGE1Q9NXZ1 904 aa18.03■□□□□ 0.48
SCARF1-206ENST00000573852 ASF1AQ9Y294 204 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms