RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 PCDH1Q08174 1060 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 DOC2AQ14183 400 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 EBPQ15125 230 aaKnown RBP11.18□□□□□ -0.62
SMIM28-201ENST00000573100 TMEM35AQ53FP2 167 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 SPANXN3Q5MJ09 141 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 TEDDM1Q5T9Z0 273 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 TIGD3Q6B0B8 471 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 ST13P4Q8IZP2 240 aaPredicted RBP11.18□□□□□ -0.62
SMIM28-201ENST00000573100 NAT8LQ8N9F0 302 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 RIT1Q92963 219 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 MED18Q9BUE0 208 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 MS4A12Q9NXJ0 267 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 SLC17A6Q9P2U8 582 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 CTNNAL1Q9UBT7 734 aa11.18□□□□□ -0.62
SMIM28-201ENST00000573100 H0Y3Z8 333 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 GNB5O14775 395 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 MSTNO14793 375 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SNPHO15079 494 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 OR10H2O60403 315 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PRAMEF4O60810 478 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SCELO95171 688 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 CRYGSP22914 178 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 TLX1P31314 330 aaPredicted RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 CASP3P42574 277 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PCYT1AP49585 367 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SRYQ05066 204 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SLAMF1Q13291 335 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 LAPTM5Q13571 262 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SETDB1Q15047 1291 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 HIST2H2ACQ16777 129 aaPredicted RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PAGE2BQ5JRK9 111 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PRAMEF9Q5VWM5 478 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 HIST2H2AA3Q6FI13 130 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 HEPHL1Q6MZM0 1159 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 TTC27Q6P3X3 843 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SCIMPQ6UWF3 145 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 ENPP6Q6UWR7 440 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 ADGRE4PQ86SQ3 457 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 ADAMTSL2Q86TH1 951 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 FAM83FQ8NEG4 500 aaPredicted RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 UCN3Q969E3 161 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 TP53INP1Q96A56 240 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 MAGOHBQ96A72 148 aaKnown RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PTCD3Q96EY7 689 aaKnown RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 CERS2Q96G23 380 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 TMEM41AQ96HV5 264 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 VPS39Q96JC1 886 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PELOQ9BRX2 385 aaKnown RBP11.17□□□□□ -0.62
SMIM28-201ENST00000573100 EFCAB11Q9BUY7 163 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 MS4A8Q9BY19 250 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 SNX15Q9NRS6 342 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 DNAJC11Q9NVH1 559 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 WWOXQ9NZC7 414 aa11.17□□□□□ -0.62
SMIM28-201ENST00000573100 NCF1BA6NI72 391 aaPredicted RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 NCF1CA8MVU1 366 aaPredicted RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 CDH16O75309 829 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 SH3BGRLO75368 114 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 GPR75O95800 540 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 NCF1P14598 390 aaPredicted RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 CHMP24386 653 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 PTPN6P29350 595 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 CXCR5P32302 372 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 SSR2P43308 183 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 TMED10P49755 219 aaKnown RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 NRG3P56975 720 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 TSNQ15631 228 aaKnown RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 GPR180Q86V85 440 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 PPIL6Q8IXY8 311 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 SNX31Q8N9S9 440 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 OR1J4Q8NGS1 313 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 WDR34Q96EX3 536 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 FAM111AQ96PZ2 611 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
SMIM28-201ENST00000573100 CNOT10Q9H9A5 744 aaKnown RBP11.16□□□□□ -0.62
SMIM28-201ENST00000573100 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 SAP18O00422 153 aaKnown RBP11.15□□□□□ -0.62
SMIM28-201ENST00000573100 TAPBPO15533 448 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 STK16O75716 305 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 TNFSF13O75888 250 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 SMNDC1O75940 238 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMIM28-201ENST00000573100 TGFB1P01137 390 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 NID1P14543 1247 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 PAX1P15863 534 aa11.15□□□□□ -0.62
SMIM28-201ENST00000573100 CD22P20273 847 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms