RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF354BQ96LW1 612 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 PPP3R2Q96LZ3 170 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 TSSK3Q96PN8 268 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 CCT7Q99832 543 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 CDCP1Q9H5V8 836 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 MANSC1Q9H8J5 431 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 LIN28AQ9H9Z2 209 aaKnown RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 MIEF1Q9NQG6 463 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 PFDN4Q9NQP4 134 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 THAP1Q9NVV9 213 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 ANAPC2Q9UJX6 822 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 B3GNT3Q9Y2A9 372 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 CNTRLQ7Z7A1 2325 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 DYTNA2CJ06 578 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 ENO4A6NNW6 628 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 GABRR3A8MPY1 467 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 SORBS2O94875 1100 aaKnown RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 LRATO95237 230 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 IGKV3-11P04433 115 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 CT62P0C5K7 136 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 DRD2P14416 443 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 PORP16435 677 aaPredicted RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 DDCP20711 480 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 NT5EP21589 574 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 BIKQ13323 160 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 ZNF267Q14586 743 aaPredicted RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 LTB4RQ15722 352 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 PRSS53Q2L4Q9 553 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 ATG16L1Q676U5 607 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 HSDL2Q6YN16 418 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 IKBIPQ70UQ0 350 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 RPS19BP1Q86WX3 136 aaKnown RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 TICAM1Q8IUC6 712 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 TRIM42Q8IWZ5 723 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 HOMEZQ8IX15 550 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 C9orf40Q8IXQ3 194 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 LRRC25Q8N386 305 aaPredicted RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 FNDC5Q8NAU1 212 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 CATSPER1Q8NEC5 780 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 C7orf57Q8NEG2 295 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 PNPLA2Q96AD5 504 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 TUBGCP3Q96CW5 907 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 SENP5Q96HI0 755 aaPredicted RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 LMF1Q96S06 567 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 EPN3Q9H201 632 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 CXorf21Q9HAI6 301 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 STMN3Q9NZ72 180 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 EXO1Q9UQ84 846 aaKnown RBP14.69□□□□□ -0.06
CHD3-215ENST00000572750 ENTPD4Q9Y227 616 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 TMED5Q9Y3A6 229 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 ZNF780BQ9Y6R6 833 aa14.69□□□□□ -0.06
CHD3-215ENST00000572750 NF1P21359 2839 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 OR5H15A6NDH6 313 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 AKAP10O43572 662 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 CLPSP04118 112 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ATP1B1P05026 303 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 BCKDHAP12694 445 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 CSNK2A2P19784 350 aaPredicted RBP14.68□□□□□ -0.06
CHD3-215ENST00000572750 SSTR4P31391 388 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 TNFSF10P50591 281 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 MLF1P58340 268 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 OCRLQ01968 901 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 PLEKHN1Q494U1 663 aaPredicted RBP14.68□□□□□ -0.06
CHD3-215ENST00000572750 PRR30Q53SZ7 412 aaPredicted RBP14.68□□□□□ -0.06
CHD3-215ENST00000572750 C6orf136Q5SQH8 315 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 C6orf163Q5TEZ5 329 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ANKRD26P1Q6NSI1 321 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 Q6ZS92 163 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 LGI4Q8N135 537 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 LIX1Q8N485 282 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ADCY4Q8NFM4 1077 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 DYDC1Q8WWB3 177 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ZNF75CPQ92670 426 aaPredicted RBP14.68□□□□□ -0.06
CHD3-215ENST00000572750 ART5Q96L15 291 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ZNF681Q96N22 645 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 BRINP2Q9C0B6 783 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 RNF32Q9H0A6 362 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 SLC35C2Q9NQQ7 365 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 EHD3Q9NZN3 535 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ABI3Q9P2A4 366 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 PSME2Q9UL46 239 aa14.68□□□□□ -0.06
CHD3-215ENST00000572750 ZFHX3Q15911 3703 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 POLQO75417 2590 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 SETD2Q9BYW2 2564 aaPredicted RBP14.67□□□□□ -0.06
CHD3-215ENST00000572750 TMEM200CA6NKL6 621 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 KLF11O14901 512 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 ITGA10O75578 1167 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 ZFAND5O76080 213 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 KITP10721 976 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 GALNSP34059 522 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 CASRP41180 1078 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 RNF4P78317 190 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 FOXK1P85037 733 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 TUBA3CQ13748 450 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 PTGR1Q14914 329 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms