RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ACVR2AP27037 513 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SSTR2P30874 369 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 CHRNB4P30926 498 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 CCNG1P51959 295 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 DUSP2Q05923 314 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 MGAT2Q10469 447 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 GALNT1Q10472 559 aaPredicted RBP16.65■□□□□ 0.26
CHD3-214ENST00000572579 FUT7Q11130 342 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 DUSP8Q13202 625 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 FNDC7Q5VTL7 733 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 CYP20A1Q6UW02 462 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SEM1Q6ZVN7 128 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 NUDT13Q86X67 352 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 EID3Q8N140 333 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 LRRC25Q8N386 305 aaPredicted RBP16.65■□□□□ 0.26
CHD3-214ENST00000572579 FBXW8Q8N3Y1 598 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 C7orf57Q8NEG2 295 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 OR4F6Q8NGB9 312 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 OR5M3Q8NGP4 307 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SLC22A8Q8TCC7 542 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 ZNF483Q8TF39 744 aaPredicted RBP16.65■□□□□ 0.26
CHD3-214ENST00000572579 ADIPOR1Q96A54 375 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SERPINI1Q99574 410 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 ZNF703Q9H7S9 590 aaPredicted RBP16.65■□□□□ 0.26
CHD3-214ENST00000572579 ZFP64Q9NPA5 681 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 Q9UFV3 132 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 HIVEP1P15822 2718 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 F8P00451 2351 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 SPG11Q96JI7 2443 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 KDM4EB2RXH2 506 aaPredicted RBP16.64■□□□□ 0.25
CHD3-214ENST00000572579 TRIM49D1C9J1S8 452 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 POC1B-GALNT4F8VUJ3 575 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 TRIM3O75382 744 aaPredicted RBP16.64■□□□□ 0.25
CHD3-214ENST00000572579 INHBAP08476 426 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 FBXW4P57775 412 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 TLE4Q04727 773 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 TBL3Q12788 808 aaKnown RBP16.64■□□□□ 0.25
CHD3-214ENST00000572579 NTRK2Q16620 822 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 DESI1Q6ICB0 168 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 RNF111Q6ZNA4 994 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 ASB5Q8WWX0 329 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 ATP6V1E2Q96A05 226 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 ART5Q96L15 291 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 ZNF180Q9UJW8 692 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 DTX4Q9Y2E6 619 aa16.64■□□□□ 0.25
CHD3-214ENST00000572579 TRGV5A0A0B4J1U4 118 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 A8MT66 165 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 BCKDKO14874 412 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 PDYNP01213 254 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MSX1P28360 303 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MAN2A2P49641 1150 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 XKP51811 444 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 DLX5P56178 289 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 PHEXP78562 749 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 TESK1Q15569 626 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 TCHHL1Q5QJ38 904 aaPredicted RBP16.63■□□□□ 0.25
CHD3-214ENST00000572579 OR52E8Q6IFG1 317 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 SLC29A4Q7RTT9 530 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 COMMD6Q7Z4G1 85 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MILR1Q7Z6M3 343 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 DMRTC2Q8IXT2 367 aaPredicted RBP16.63■□□□□ 0.25
CHD3-214ENST00000572579 FAM13CQ8NE31 585 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 TM4SF18Q96CE8 201 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 FMO2Q99518 471 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MRPL57Q9BQC6 102 aaKnown RBP16.63■□□□□ 0.25
CHD3-214ENST00000572579 PELOQ9BRX2 385 aaKnown RBP16.63■□□□□ 0.25
CHD3-214ENST00000572579 C1QTNF3Q9BXJ4 246 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 SLC6A15Q9H2J7 730 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MCCC2Q9HCC0 563 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 MTRF1LQ9UGC7 380 aaKnown RBP16.63■□□□□ 0.25
CHD3-214ENST00000572579 ADAM29Q9UKF5 820 aa16.63■□□□□ 0.25
CHD3-214ENST00000572579 C2orf92A0A1B0GVN3 265 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 OR6C76A6NM76 312 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 DYRK3O43781 588 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 HCN1O60741 890 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 COL6A2P12110 1019 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 CHN1P15882 459 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 SERPINB3P29508 390 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 TRPC1P48995 793 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 SERPINB9P50453 376 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 KCNJ2P63252 427 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 UNC50Q53HI1 259 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 FAM180BQ6P0A1 224 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 FAM111BQ6SJ93 734 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 ACAD11Q709F0 780 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 OR4K14Q8NGD5 310 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 TP53INP1Q96A56 240 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 HBEGFQ99075 208 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 OR10A5Q9H207 317 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 ACKR4Q9NPB9 350 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 KCNJ16Q9NPI9 418 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHD3-214ENST00000572579 CNIH4Q9P003 139 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 ACAD8Q9UKU7 415 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 PCDHA9Q9Y5H5 950 aa16.62■□□□□ 0.25
CHD3-214ENST00000572579 ANKRD33BA6NCL7 494 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 CPMP14384 443 aa16.61■□□□□ 0.25
CHD3-214ENST00000572579 PIK3R1P27986 724 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms