RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 C4orf51C9J302 202 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 PSMD12O00232 456 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 TFECO14948 347 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 B3GALT2O43825 422 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 FGF4P08620 206 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 CAPN3P20807 821 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 RFC3P40938 356 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 SSR2P43308 183 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 MTTPP55157 894 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 CUL3Q13618 768 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 FAM219BQ5XKK7 198 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 ABHD17CQ6PCB6 329 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 SULF2Q8IWU5 870 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 DDIASQ8IXT1 998 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 CA13Q8N1Q1 262 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 FAM57AQ8TBR7 257 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF75CPQ92670 426 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 AICDAQ9GZX7 198 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF395Q9H8N7 513 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 PFDN4Q9NQP4 134 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 ZDHHC2Q9UIJ5 367 aa13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-207ENST00000572346 TRBV11-1A0A0K0K1C0 115 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 KLRC4-KLRK1H3BQV0 150 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 SLC28A1O00337 649 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 RTCAO00442 366 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 HS6ST1O60243 411 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 ETHE1O95571 254 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 ARRB2P32121 409 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 PTGS2P35354 604 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 RPL14P50914 215 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 CLCN2P51788 898 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 TLE4Q04727 773 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 BTKQ06187 659 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 TESK1Q15569 626 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 SPDYAQ5MJ70 313 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 MEX3BQ6ZN04 569 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 CD163Q86VB7 1156 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 B3GNT7Q8NFL0 401 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 TREX2Q9BQ50 279 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 MCCC2Q9HCC0 563 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 PRDM7Q9NQW5 492 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 COQ3Q9NZJ6 369 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 VPS29Q9UBQ0 182 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF223Q9UK11 482 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 HRH3Q9Y5N1 445 aa13.75□□□□□ -0.21
NPLOC4-207ENST00000572346 TMEM233B4DJY2 109 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 KLF11O14901 512 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 RGS14O43566 566 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 PEX1O43933 1283 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SKAP2O75563 359 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ITGA10O75578 1167 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 MYO1DO94832 1006 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SEMA3DO95025 777 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 TPOP07202 933 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 CERS1P27544 350 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ARFIP1P53367 373 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 CMPK2Q5EBM0 449 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 CYP20A1Q6UW02 462 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 PAGE2Q7Z2X7 111 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 MDGA2Q7Z553 956 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 NUDT13Q86X67 352 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 MARVELD2Q8N4S9 558 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 TMEM156Q8N614 296 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ACOT4Q8N9L9 421 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SORT1Q99523 831 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SORBS1Q9BX66 1292 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 NPLQ9BXD5 320 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 MMACHCQ9Y4U1 282 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 HCFC1P51610 2035 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
NPLOC4-207ENST00000572346 SERTM1A2A2V5 107 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 PLPP1O14494 284 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 LINC00032P0C843 101 aa13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 HIST1H1TP22492 207 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-207ENST00000572346 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms