RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 RCAN2Q14206 197 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 SPRED3Q2MJR0 410 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 TMEM35AQ53FP2 167 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 STEAP4Q687X5 459 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 YTHDF3Q7Z739 585 aaKnown RBP18.12■□□□□ 0.49
CCDC40-206ENST00000572083 PACS2Q86VP3 889 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 LRRC75A-AS1Q8N1F1 130 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 RNF175Q8N4F7 328 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 C7orf57Q8NEG2 295 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 SPATA3Q8NHX4 192 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 SPPL2AQ8TCT8 520 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 ISL2Q96A47 359 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 OR51B5Q9H339 312 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 ADAM21Q9UKJ8 722 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 IKBKGQ9Y6K9 419 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 ATRQ13535 2644 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 OR6C76A6NM76 312 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 WASHC1A8K0Z3 465 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 CES2O00748 559 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 GNB5O14775 395 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 CASKO14936 926 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 CCNT2O60583 730 aaKnown RBP18.11■□□□□ 0.49
CCDC40-206ENST00000572083 NAGLUP54802 743 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 HNRNPH2P55795 449 aaKnown RBP18.11■□□□□ 0.49
CCDC40-206ENST00000572083 OR4C11Q6IEV9 310 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 YRDCQ86U90 279 aaKnown RBP18.11■□□□□ 0.49
CCDC40-206ENST00000572083 GPR180Q86V85 440 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 GPSM1Q86YR5 675 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 GCNT2Q8N0V5 402 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 ZNF441Q8N8Z8 693 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 SLC44A1Q8WWI5 657 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 TANKQ92844 425 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 RIT1Q92963 219 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 EXT2Q93063 718 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 PERPQ96FX8 193 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 PBKQ96KB5 322 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 NAP1L3Q99457 506 aaPredicted RBP18.11■□□□□ 0.49
CCDC40-206ENST00000572083 SFXN3Q9BWM7 321 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 ANGPTL4Q9BY76 406 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 DERL2Q9GZP9 239 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 MS4A12Q9NXJ0 267 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 C6orf203Q9P0P8 240 aaPredicted RBP18.11■□□□□ 0.49
CCDC40-206ENST00000572083 RTTNQ86VV8 2226 aa18.11■□□□□ 0.49
CCDC40-206ENST00000572083 STAB1Q9NY15 2570 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 ARID1AO14497 2285 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 MED12Q93074 2177 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 C2orf92A0A1B0GVN3 265 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 GLOD5A6NK44 160 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CAPN14A8MX76 684 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 GOLGA6L6A8MZA4 724 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 SNX4O95219 450 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CYP4B1P13584 511 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 SSTR4P31391 388 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CPOXP36551 454 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 BIKQ13323 160 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 DDX39BQ13838 428 aaKnown RBP18.1■□□□□ 0.49
CCDC40-206ENST00000572083 OR4D1Q15615 310 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 KHDRBS2Q5VWX1 349 aaKnown RBP18.1■□□□□ 0.49
CCDC40-206ENST00000572083 SULT1C3Q6IMI6 304 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 ANKMY2Q8IV38 441 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 PRR22Q8IZ63 422 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 PDIK1LQ8N165 341 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 FAM83FQ8NEG4 500 aaPredicted RBP18.1■□□□□ 0.49
CCDC40-206ENST00000572083 PIGTQ969N2 578 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 INTS12Q96CB8 462 aaKnown RBP18.1■□□□□ 0.49
CCDC40-206ENST00000572083 TUBA1CQ9BQE3 449 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 BDH2Q9BUT1 245 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CAB39LQ9H9S4 337 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CD274Q9NZQ7 290 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 PHF11Q9UIL8 331 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 NPFFR2Q9Y5X5 522 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 TEX264Q9Y6I9 313 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 CUBNO60494 3623 aa18.1■□□□□ 0.49
CCDC40-206ENST00000572083 SIAH2O43255 324 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 TLX1P31314 330 aaPredicted RBP18.09■□□□□ 0.49
CCDC40-206ENST00000572083 CASP3P42574 277 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 CASP2P42575 452 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 TMED10P49755 219 aaKnown RBP18.09■□□□□ 0.49
CCDC40-206ENST00000572083 RAP1GDS1P52306 607 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 MGAT5Q09328 741 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 TBCCQ15814 346 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 MED27Q6P2C8 311 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 CAPN12Q6ZSI9 719 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 LAS2Q8IYD9 372 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 OR7G3Q8NG95 312 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 ZPLD1Q8TCW7 415 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 NANOS1Q8WY41 292 aaKnown RBP18.09■□□□□ 0.49
CCDC40-206ENST00000572083 CMTM7Q96FZ5 175 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 TMEM41AQ96HV5 264 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 CCL19Q99731 98 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 PIP5K1AQ99755 562 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 PELOQ9BRX2 385 aaKnown RBP18.09■□□□□ 0.49
CCDC40-206ENST00000572083 UBTD1Q9HAC8 227 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 POPDC3Q9HBV1 291 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 SNX15Q9NRS6 342 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 TESMINQ9Y4I5 508 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 EXPH5Q8NEV8 1989 aa18.09■□□□□ 0.49
CCDC40-206ENST00000572083 GOLGA6L10A0A0M3HER8 536 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 H0Y3Z8 333 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 PLPP1O14494 284 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms