RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MRGPRGQ86SM5 289 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CHERPQ8IWX8 916 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.42■□□□□ 0.223e-10■■■■■ 88.3
CTDNEP1-207ENST00000572043 KLHL29Q96CT2 875 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCDC126Q96EE4 140 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 SGCZQ96LD1 299 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 FAIM2Q9BWQ8 316 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 TTTY12Q9BZ98 90 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 PFDN4Q9NQP4 134 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 CES1P1Q9UKY3 287 aa16.42■□□□□ 0.22
CTDNEP1-207ENST00000572043 C2orf92A0A1B0GVN3 265 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 GNG14A0A1W2PPG7 69 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 ACOT7O00154 380 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 CPA3P15088 417 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 SERPINB3P29508 390 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 GALNSP34059 522 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 RAE1P78406 368 aaKnown RBP16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 DUSP2Q05923 314 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZNF791Q3KP31 576 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 SPDYAQ5MJ70 313 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 HLA-DQA1Q5Y7H0 255 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 FAM111BQ6SJ93 734 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 LYPD8Q6UX82 237 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 Q6ZPB1 254 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 GK5Q6ZS86 529 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 CNPY4Q8N129 248 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 GOLM1Q8NBJ4 401 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 FAM13CQ8NE31 585 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 ADCY4Q8NFM4 1077 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR10G3Q8NGC4 313 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 ITLN2Q8WWU7 325 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 SPACA9Q96E40 222 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 FAM173AQ9BQD7 235 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR10A5Q9H207 317 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 HEY2Q9UBP5 337 aa16.41■□□□□ 0.22
CTDNEP1-207ENST00000572043 CNTRLQ7Z7A1 2325 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 CCDC151A5D8V7 595 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 GOLGA6L10A6NI86 522 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 OR6C76A6NM76 312 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 PRSS44E7EML9 344 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 PRRG2O14669 202 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 TPOP07202 933 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 IL3P08700 152 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 CSNK2A2P19784 350 aaPredicted RBP16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 PTGS2P35354 604 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 DCTP40126 519 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 ADORA2A-AS1P86434 159 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 ACSM2AQ08AH3 577 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 IFFO1Q0D2I5 559 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 LTB4RQ15722 352 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 NNATQ16517 81 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 IMPG1Q17R60 797 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 ACSM2BQ68CK6 577 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 FRMD7Q6ZUT3 714 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 DOLPP1Q86YN1 238 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 PRR22Q8IZ63 422 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 GBP7Q8N8V2 638 aaPredicted RBP16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 CDC26Q8NHZ8 85 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 TNFRSF12AQ9NP84 129 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 TUBA8Q9NY65 449 aaPredicted RBP16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 BCAP29Q9UHQ4 241 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 MCM8Q9UJA3 840 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 UTS2RQ9UKP6 389 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 DLGAP4Q9Y2H0 992 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 MEMO1Q9Y316 297 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 ZNF780BQ9Y6R6 833 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 CROCCQ5TZA2 2017 aa16.4■□□□□ 0.22
CTDNEP1-207ENST00000572043 COL12A1Q99715 3063 aa16.39■□□□□ 0.22
CTDNEP1-207ENST00000572043 ATP6AP2A0A1C7CYW4 349 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 ATP6AP2O75787 350 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLU7O95391 586 aaKnown RBP16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 FBXO45P0C2W1 286 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 MAGEA5P43359 124 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 TRA2BP62995 288 aaKnown RBP16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 FUT7Q11130 342 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 EXOSC7Q15024 291 aaKnown RBP16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 PRICKLE4Q2TBC4 344 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SPIN4Q56A73 249 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC22A10Q63ZE4 541 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 MTFR2Q6P444 385 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 CD163Q86VB7 1156 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC22A16Q86VW1 577 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 C10orf107Q8IVU9 208 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 TAGAPQ8N103 731 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 VWA5B2Q8N398 1253 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC15A4Q8N697 577 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 TMEM251Q8N6I4 163 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF615Q8N8J6 731 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 SIMC1Q8NDZ2 872 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 RDH11Q8TC12 318 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 JSRP1Q96MG2 331 aaPredicted RBP16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 IL1RL2Q9HB29 575 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 OXSMQ9NWU1 459 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 FIS1Q9Y3D6 152 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 LIPGQ9Y5X9 500 aa16.39■□□□□ 0.21
CTDNEP1-207ENST00000572043 FLNCQ14315 2725 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms