RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RNF103-CHMP3A0A140T963 221 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 A0A1W2PNU3 283 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 CDRT15L2A8MXV6 281 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDH17O14917 1159 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PGRMC2O15173 223 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 COQ9O75208 318 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ALOX12BO75342 701 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 UNC5CO95185 931 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 IGHEP01854 428 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ATP1B1P05026 303 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 KRT16P08779 473 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 RAB40ALP0C0E4 278 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC35E2P0CK97 266 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 EFNA1P20827 205 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PPIBP23284 216 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 DLSTP36957 453 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 STT3AP46977 705 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 EIF1AXP47813 144 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PGDP52209 483 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 HNRNPFP52597 415 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 EMP2P54851 167 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR4D2P58180 307 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF155Q12901 538 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 BIKQ13323 160 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNASE1L3Q13609 305 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TP53BP2Q13625 1128 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ERV3-1Q14264 604 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 NKG7Q16617 165 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZSCAN26Q16670 478 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNAL1Q4LDG9 190 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ALKBH2Q6NS38 261 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM180BQ6P0A1 224 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM199XQ6PEV8 388 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC2A7Q6PXP3 512 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM107Q6UX40 140 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TREML4Q6UXN2 200 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF621Q6ZSS3 439 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF771Q7L3S4 317 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 RAB43Q86YS6 212 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 FUNDC1Q8IVP5 155 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ST13P4Q8IZP2 240 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 CLECL1Q8IZS7 167 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARHGAP24Q8N264 748 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM52Q8NDY8 209 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR56A1Q8NGH5 318 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR9A2Q8NGT5 310 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR2Y1Q8NGV0 311 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR14A16Q8NHC5 309 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 SFXN5Q8TD22 340 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 DAZLQ92904 295 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 RIT1Q92963 219 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TSLPQ969D9 159 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 GTPBP3Q969Y2 492 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 COQ8BQ96D53 544 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 CNRIP1Q96F85 164 aaPredicted RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAGED4Q96JG8 741 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 AMDHD1Q96NU7 426 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 MS4A4EQ96PG1 132 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 NPAS2Q99743 824 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC35A5Q9BS91 424 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 EFHD1Q9BUP0 239 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 CNPPD1Q9BV87 410 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 SCNM1Q9BWG6 230 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 GPR87Q9BY21 358 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ALOXE3Q9BYJ1 711 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 VN1R1Q9GZP7 353 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 RAD21L1Q9H4I0 556 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 IL1RL2Q9HB29 575 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 C3orf14Q9HBI5 128 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ADAP2Q9NPF8 381 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ASCL3Q9NQ33 180 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PNO1Q9NRX1 252 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZCCHC3Q9NUD5 404 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARL8BQ9NVJ2 186 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TAS2R9Q9NYW1 312 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 TAS2R7Q9NYW3 318 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAN2B2Q9Y2E5 1009 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 L3MBTL1Q9Y468 752 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 NEUROG3Q9Y4Z2 214 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 CLCA3PQ9Y6N3 262 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 PI4KAP42356 2102 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZFHX2Q9C0A1 2572 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 RALGAPA1Q6GYQ0 2036 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARHGEF17Q96PE2 2063 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 MYOCOSA0A1B0GUC4 107 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM247A6NEH6 219 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 VSTM2BA6NLU5 285 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 EVPLLA8MZ36 301 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 MYO1GB0I1T2 1018 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 C17orf105B2RV13 164 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 GYG2O15488 501 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRAMEF2O60811 474 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNAJB6O75190 326 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 STAMBPO95630 424 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 KRT75O95678 551 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms