RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ADNP2Q6IQ32 1131 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SBSNQ6UWP8 590 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZNF793Q6ZN11 406 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLCO4C1Q6ZQN7 724 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 GRAMD2AQ8IUY3 354 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TRIM42Q8IWZ5 723 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 CCDC170Q8IYT3 715 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TAGAPQ8N103 731 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 CNEP1R1Q8N9A8 125 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TTLQ8NG68 377 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 RBM18Q96H35 190 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC39A3Q9BRY0 314 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMEM204Q9BSN7 226 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ERVK-6Q9BXR3 956 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLCO5A1Q9H2Y9 848 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 TAS2R13Q9NYV9 303 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 WWOXQ9NZC7 414 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 IKZF3Q9UKT9 509 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 MAPRE3Q9UPY8 281 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 ERVK-19Q9WJR5 959 aa9.45□□□□□ -0.9
CTDNEP1-202ENST00000570380 PCNX3Q9H6A9 2034 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 IQANK1A0A1B0GTG1 560 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 CAPN14A8MX76 684 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 CLPSP04118 112 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 CRHP06850 196 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 KIR2DL2P43627 348 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNJ5P48544 419 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 LHX2P50458 406 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 TERF1P54274 439 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC37A1P57057 533 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 IL2P60568 153 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 CDK16Q00536 496 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 FUT7Q11130 342 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 GPS1Q13098 491 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLBPQ14493 270 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 RBM20Q5T481 1227 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 ARMC3Q5W041 872 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 SCIMPQ6UWF3 145 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 ANGPTL8Q6UXH0 198 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 C4orf22Q6V702 233 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 RNF111Q6ZNA4 994 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 UBE3DQ7Z6J8 389 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 BBOF1Q8ND07 529 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR1J4Q8NGS1 313 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 TRMT61AQ96FX7 289 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 F2RL3Q96RI0 385 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 C20orf96Q9NUD7 363 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 TMEM160Q9NX00 188 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 HEY2Q9UBP5 337 aa9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-202ENST00000570380 TGP01266 2768 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 A0A096LNT2 108 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 C2orf72A6NCS6 295 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ANKDD1BA6NHY2 528 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 CDC7O00311 574 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 HCRTR2O43614 444 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 DYRK3O43781 588 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 NDUFS7O75251 213 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 CGAP01215 116 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 THBS1P07996 1170 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 SOD3P08294 240 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ENO2P09104 434 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GNAZP19086 355 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 TBXA2RP21731 343 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ATP5A1P25705 553 aaKnown RBP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GSTM2P28161 218 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GABRB3P28472 473 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GCKP35557 465 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GMPRP36959 345 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 CDKN1AP38936 164 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 SLC6A12P48065 614 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 GFRA1P56159 465 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 CLDN18P56856 261 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 PCDH1Q08174 1060 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZNF267Q14586 743 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 PPP1R3AQ16821 1122 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 KBTBD12Q3ZCT8 623 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 HSP90AA5PQ58FG0 334 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 P4HA3Q7Z4N8 544 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 MILR1Q7Z6M3 343 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 LMNTD2Q8IXW0 634 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ACOT4Q8N9L9 421 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 ZNF610Q8N9Z0 462 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 C7orf57Q8NEG2 295 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 CALML6Q8TD86 181 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 AKAP1Q92667 903 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 PLPPR2Q96GM1 343 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 HES6Q96HZ4 224 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 KRT12Q99456 494 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR2B2Q9GZK3 357 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 NT5DC2Q9H857 520 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 SERHLQ9NQF3 203 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 SNX15Q9NRS6 342 aa9.43□□□□□ -0.9
CTDNEP1-202ENST00000570380 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms