RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 NLRP14Q86W24 1093 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CROCCP3Q8IVE0 287 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CCDC50Q8IVM0 306 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CCDC60Q8IWA6 550 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 ZBTB8OSQ8IWT0 167 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 C10orf67Q8IYJ2 551 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 MCOLN2Q8IZK6 566 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PRELID2Q8N945 189 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 OR2T12Q8NG77 320 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PSMA8Q8TAA3 256 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 RNASE8Q8TDE3 154 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PHLDA1Q8WV24 401 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 SLCO2A1Q92959 643 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CD101Q93033 1021 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 AP2M1Q96CW1 435 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SNF8Q96H20 258 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 MARK4Q96L34 752 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PANX3Q96QZ0 392 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 GAL3ST4Q96RP7 486 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 JPH2Q9BR39 696 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 CCDC77Q9BR77 488 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ZNF559Q9BR84 538 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TCHPQ9BT92 498 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ROPN1BQ9BZX4 212 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 TRIM7Q9C029 511 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 NEUROG2Q9H2A3 272 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 RIMS4Q9H426 269 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 ACTL8Q9H568 366 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 DHX33Q9H6R0 707 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 AZI2Q9H6S1 392 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 LRRC19Q9H756 370 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ROPN1Q9HAT0 212 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 SDR39U1Q9NRG7 319 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PNPLA3Q9NST1 481 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ZDHHC18Q9NUE0 388 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PARVAQ9NVD7 372 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 COMMD8Q9NX08 183 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ADAM22Q9P0K1 906 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ASIC3Q9UHC3 531 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ANAPC7Q9UJX3 599 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SNX24Q9Y343 169 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 STYXL1Q9Y6J8 313 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 FER1L6Q2WGJ9 1857 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 GRIN2DO15399 1336 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SSC5DA1L4H1 1573 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 DOCK7Q96N67 2140 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 IGKV6D-21A0A0A0MT36 114 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 LOC101059948A0A1B0GTJ6 334 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 GOLGA6L7A0A1B0GV03 622 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 F8VVB4 439 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 F8VWA3 439 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 OGTO15294 1046 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 MED7O43513 233 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PSTPIP1O43586 416 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PRKRAO75569 313 aaKnown RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 TOM1L1O75674 476 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DDHD2O94830 711 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SLC25A27O95847 323 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 FAM107AO95990 144 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 TNNC2P02585 160 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PAEPP09466 180 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 CLTAP09496 248 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SP9P0CG40 484 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 CDH3P22223 829 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 GLRA2P23416 452 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DGKAP23743 735 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DUTP33316 252 aaKnown RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 NF2P35240 595 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 ARL2P36404 184 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 IER3P46695 156 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 MARCKSL1P49006 195 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 ACOT2P49753 483 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SLC26A2P50443 739 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SMSP52788 366 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 NLRP11P59045 1033 aaKnown RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 MAGOHP61326 146 aaKnown RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 IRX3P78415 501 aaPredicted RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 KLC1Q07866 573 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 IL10RBQ08334 325 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DRP2Q13474 957 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 RBBP7Q16576 425 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 MAPK6Q16659 721 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SGSM1Q2NKQ1 1148 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 IFI44LQ53G44 452 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PDSS1Q5T2R2 415 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 LRRC38Q5VT99 294 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DNAJC24Q6P3W2 148 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 TTC27Q6P3X3 843 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 METTL7BQ6UX53 244 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PRSS42Q7Z5A4 293 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 DEFB132Q7Z7B7 95 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 PHF13Q86YI8 300 aaPredicted RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 SPATA2LQ8IUW3 424 aaPredicted RBP3.37□□□□□ -1.87
UBR1-211ENST00000569971 WDR49Q8IV35 697 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 SERPINA12Q8IW75 414 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 KLHDC8AQ8IYD2 350 aa3.37□□□□□ -1.87
UBR1-211ENST00000569971 KATNAL2Q8IYT4 538 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms