RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RCAN2Q14206 197 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLC9A3R2Q15599 337 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 CCDC6Q16204 474 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PDK4Q16654 411 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 OTUD1Q5VV17 481 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 DOK6Q6PKX4 331 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 BOD1L2Q8IYS8 172 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 BATF2Q8N1L9 274 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ADAMTS14Q8WXS8 1223 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLAMF9Q96A28 289 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MARS2Q96GW9 593 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 ZNF48Q96MX3 618 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 EBNA1BP2Q99848 306 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 RANBP3Q9H6Z4 567 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 POT1Q9NUX5 634 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 RDH8Q9NYR8 311 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MID2Q9UJV3 735 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 POLR3KQ9Y2Y1 108 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 TRIOO75962 3097 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 CACNA1HO95180 2353 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 C2CD4BA6NLJ0 364 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLC33A1O00400 549 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 HAUS5O94927 633 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLC25A14O95258 325 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 NSA2O95478 260 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 CPNE6O95741 557 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 OAS1P00973 400 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 MC3RP41968 323 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 RPL35P42766 123 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 PGFP49763 221 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 RAB4BP61018 213 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 TNK2Q07912 1038 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 POM121L1PQ3SYA9 428 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SPANXN2Q5MJ10 180 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 NCEH1Q6PIU2 408 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FAM92BQ6ZTR7 304 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FUNDC1Q8IVP5 155 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 DCUN1D3Q8IWE4 304 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ZADH2Q8N4Q0 377 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 CLEC1AQ8NC01 280 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 GIPC3Q8TF64 312 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FMO2Q99518 471 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 TMBIM4Q9HC24 238 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ACSL5Q9ULC5 683 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 UTP11Q9Y3A2 253 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 CLDN4O14493 209 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ADAM12O43184 909 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 LIASO43766 372 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PKLRP30613 574 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 S100A7P31151 101 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 RGS8P57771 180 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 SRP54P61011 504 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 GRIK2Q13002 908 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SNTB1Q13884 538 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 TCTN1Q2MV58 587 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MOGAT2Q3SYC2 334 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 AKIRIN2Q53H80 203 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ARSIQ5FYB1 569 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 GPRIN1Q7Z2K8 1008 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 VRK2Q86Y07 508 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 BRIX1Q8TDN6 353 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 GRHL3Q8TE85 626 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MAFIPQ8WZ33 124 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ACTR6Q9GZN1 396 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 LINC00597Q9H2U6 94 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 KLHL1Q9NR64 748 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 OXSMQ9NWU1 459 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 HCN3Q9P1Z3 774 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 NXT1Q9UKK6 140 aaKnown RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 SARDHQ9UL12 918 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PLLPQ9Y342 182 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 LYVE1Q9Y5Y7 322 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 HRKO00198 91 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MID1O15344 667 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PSTPIP1O43586 416 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 AHSA1O95433 338 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 DGCR6Q14129 220 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MSS51Q4VC12 460 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 GCNT6Q5T4J0 391 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ANKRD22Q5VYY1 191 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 LINC00696Q6ZRV3 163 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 C3orf62Q6ZUJ4 267 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 TMEM173Q86WV6 379 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 CCNJLQ8IV13 435 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FOXRED2Q8IWF2 684 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ARHGAP24Q8N264 748 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 PYDC1Q8WXC3 89 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 CORO2AQ92828 525 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLCO2A1Q92959 643 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MYDGFQ969H8 173 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 UBE2E3Q969T4 207 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 MARC2Q969Z3 335 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 FAR2Q96K12 515 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms