RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF780BQ9Y6R6 833 aa12.81□□□□□ -0.36
HERPUD1-218ENST00000569569 EXPH5Q8NEV8 1989 aa12.81□□□□□ -0.36
HERPUD1-218ENST00000569569 CLEC18AA5D8T8 446 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ASPDHA6ND91 283 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 OR6C76A6NM76 312 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 NPIPB8E9PQR5 432 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 KLRC4-KLRK1H3BQV0 150 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 TM9SF1O15321 606 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 RGS14O43566 566 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 SEC22BO75396 215 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ATP1B1P05026 303 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 CHRNGP07510 517 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 IL3P08700 152 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 NT5EP21589 574 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 PRPH2P23942 346 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 SOX3P41225 446 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 SERPINB4P48594 390 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 SLC37A1P57057 533 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF763Q0D2J5 394 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 FUT7Q11130 342 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 UBAP2LQ14157 1087 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 PIGGQ5H8A4 983 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 KANK2Q63ZY3 851 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 OPN5Q6U736 354 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 CLEC18BQ6UXF7 455 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 IL20RBQ6UXL0 311 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ZCCHC23Q6ZST2 131 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 FAM26EQ8N5C1 309 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 SLC15A4Q8N697 577 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 CLEC18CQ8NCF0 446 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF681Q96N22 645 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 TIMMDC1Q9NPL8 285 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 WBP11Q9Y2W2 641 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 KLF13Q9Y2Y9 288 aaPredicted RBP12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 TRAF6Q9Y4K3 522 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 DNAJC15Q9Y5T4 150 aa12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 NUP214P35658 2090 aaPredicted RBP12.8□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF407Q9C0G0 2248 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 OR6B1O95007 311 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 CLPSP04118 112 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 CT62P0C5K7 136 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 NEFHP12036 1026 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 SSTR4P31391 388 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 TDGF1P3P51864 188 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 PMP22Q01453 160 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.364e-9■■■■■ 33.3
HERPUD1-218ENST00000569569 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 KIAA0040Q15053 153 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 NOXRED1Q6NXP6 359 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 Q6ZSR9 355 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 OR6Y1Q8NGX8 325 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 CNRIP1Q96F85 164 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 SGCZQ96LD1 299 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 TUBB1Q9H4B7 451 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 KCNK9Q9NPC2 374 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 C1orf109Q9NX04 203 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 EHD3Q9NZN3 535 aa12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 POLR3HQ9Y535 204 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-218ENST00000569569 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 BIRC5O15392 142 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ZWINTO95229 277 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 LINC00032P0C843 101 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 DDCP20711 480 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 S1PR1P21453 382 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 MST1P26927 711 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 MGAT2Q10469 447 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 UGT3A2Q3SY77 523 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 FAM180BQ6P0A1 224 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 FAM111BQ6SJ93 734 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 CCDC116Q8IYX3 515 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 LRRC25Q8N386 305 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF615Q8N8J6 731 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 TWIST2Q8WVJ9 160 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms