RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TMPRSS11DO60235 418 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 EEDO75530 441 aaKnown RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 KLHL2O95198 593 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 SLC35E2P0CK97 266 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 PIK3R1P27986 724 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 ARL1P40616 181 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 TMED10P49755 219 aaKnown RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 HSPB2Q16082 182 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 MROH9Q5TGP6 573 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 OR52E8Q6IFG1 317 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 GOLGA7Q7Z5G4 137 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 ULK2Q8IYT8 1036 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 WDR20Q8TBZ3 569 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 ATP6V1E2Q96A05 226 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 ZNF597Q96LX8 424 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 PROK2Q9HC23 129 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 SNX15Q9NRS6 342 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 DNAJB12Q9NXW2 375 aaKnown RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 CPSF2Q9P2I0 782 aaKnown RBP12.55□□□□□ -0.4
CNOT1-215ENST00000569020 AKAP9Q99996 3911 aa12.55□□□□□ -0.4
CNOT1-215ENST00000569020 A0A096LPK6 155 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 C15orf38-AP3S2A0A0A6YYH1 394 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 WASHC1A8K0Z3 465 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 LRATO95237 230 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 CLDN9O95484 217 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 AIFM1O95831 613 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 TYK2P29597 1187 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 SSTR4P31391 388 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 KIR2DL3P43628 341 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 TRPC1P48995 793 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 NEK2P51955 445 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 IST1P53990 364 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 DLX5P56178 289 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 NRG3P56975 720 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 RPP38P78345 283 aaKnown RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 DUSP8Q13202 625 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.42e-10■■■■■ 35.2
CNOT1-215ENST00000569020 UAP1Q16222 522 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 C6orf163Q5TEZ5 329 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 METTL2BQ6P1Q9 378 aaKnown RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 ZDHHC24Q6UX98 284 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 GALNT12Q8IXK2 581 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 L3MBTL4Q8NA19 623 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 NRGNQ92686 78 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 NINJ1Q92982 152 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 MRRFQ96E11 262 aaKnown RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 SERPINI1Q99574 410 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 POLDIP3Q9BY77 421 aaKnown RBP12.54□□□□□ -0.4
CNOT1-215ENST00000569020 RNF11Q9Y3C5 154 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 POLQO75417 2590 aa12.54□□□□□ -0.4
CNOT1-215ENST00000569020 DVL2O14641 736 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 TRIM3O75382 744 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 CTAG2O75638 210 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 TRAPPC6AO75865 159 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 SNX4O95219 450 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 SIX3O95343 332 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 EPPINO95925 133 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 GBAP04062 536 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 CLPSP04118 112 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 UQCRC1P31930 480 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 PHBP35232 272 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 MASP1P48740 699 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 SERPINB8P50452 374 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 ZNF572Q7Z3I7 529 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 PACS2Q86VP3 889 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 PM20D2Q8IYS1 436 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 OR4K14Q8NGD5 310 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 SECISBP2Q96T21 854 aaKnown RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 OR10A5Q9H207 317 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 NOL11Q9H8H0 719 aaKnown RBP12.53□□□□□ -0.4
CNOT1-215ENST00000569020 CXorf21Q9HAI6 301 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 AHSPQ9NZD4 102 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 EDARQ9UNE0 448 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 CCDC168Q8NDH2 2452 aa12.53□□□□□ -0.4
CNOT1-215ENST00000569020 TACC2O95359 2948 aa12.52□□□□□ -0.4
CNOT1-215ENST00000569020 HMX2A2RU54 273 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 SYT5O00445 386 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 PGRMC2O15173 223 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 SEMA3DO95025 777 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 IL2RAP01589 272 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 KRT15P19012 456 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 NT5EP21589 574 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 BMP5P22003 454 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 TIMP3P35625 211 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 ASCL1P50553 236 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 CCNG1P51959 295 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 FBXW4P57775 412 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
CNOT1-215ENST00000569020 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
CNOT1-215ENST00000569020 FUT7Q11130 342 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms