RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PDIA2Q13087 525 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 ZNF267Q14586 743 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 PCBP2Q15366 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 EEF1A1P5Q5VTE0 462 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 HLA-DQA1Q5Y7H0 255 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 CLEC9AQ6UXN8 241 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 TAOK1Q7L7X3 1001 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 ANKMY2Q8IV38 441 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 C17orf47Q8NEP4 570 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 STAG3L4Q8TBR4 150 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 ZPLD1Q8TCW7 415 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 ESAMQ96AP7 390 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 RILPQ96NA2 401 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 C15orf41Q9Y2V0 281 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 EEF1E1-BLOC1S5C9J1V9 151 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 K7EPI3 171 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 EEF1E1O43324 174 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 ERN1O75460 977 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 ACTL6AO96019 429 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 HEXAP06865 529 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 SLC35E2BP0CK96 405 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 SLC35E2P0CK97 266 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 NKX6-1P78426 367 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 OR4D1Q15615 310 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 FBXO48Q5FWF7 155 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 GRHL2Q6ISB3 625 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 DGAT2L6Q6ZPD8 337 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 ZNF441Q8N8Z8 693 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 SPPL2AQ8TCT8 520 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 TMEM41AQ96HV5 264 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 UBXN10Q96LJ8 280 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 TRIB1Q96RU8 372 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 GPR22Q99680 433 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 SFXN3Q9BWM7 321 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 EPB41L4BQ9H329 900 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 NUDT4Q9NZJ9 180 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 OPTCQ9UBM4 332 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 PCDHGA11Q9Y5H2 935 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 NPFFR2Q9Y5X5 522 aa14.41□□□□□ -0.1
HERPUD1-215ENST00000568676 SAP18O00422 153 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 PLPP1O14494 284 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 SEC31AO94979 1220 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 ACSL3O95573 720 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 HRGP04196 525 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 EPB42P16452 691 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 TCP1P17987 556 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 BMP7P18075 431 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 CD53P19397 219 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 PTX3P26022 381 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 CASP3P42574 277 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 DR1Q01658 176 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 ZKSCAN8Q15776 578 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 C18orf63Q68DL7 685 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 TMEM81Q6P7N7 255 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 CYS1Q717R9 158 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 LRRC75A-AS1Q8N1F1 130 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 SPATA6LQ8N4H0 392 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 HUS1BQ8NHY5 278 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 LINC01560Q8TB33 94 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 UBTD2Q8WUN7 234 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 ABTB1Q969K4 478 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 REPS1Q96D71 796 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 WDYHV1Q96HA8 205 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 TM9SF2Q99805 663 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 CPNE1Q99829 537 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 UGT2B28Q9BY64 529 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 OR51B5Q9H339 312 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 TRMT1Q9NXH9 659 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 PSD3Q9NYI0 1048 aa14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 MTO1Q9Y2Z2 717 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-215ENST00000568676 NCKAP5O14513 1909 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 HRNRQ86YZ3 2850 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 TMIGD3P0DMS9 266 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 NR2F6P10588 404 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CYP4B1P13584 511 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CPN1P15169 458 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 NAGAP17050 411 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 HNRNPH2P55795 449 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 WNT3P56703 355 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 RAB10P61026 200 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CUL3Q13618 768 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 FNDC7Q5VTL7 733 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 LIPJQ5W064 366 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 MRM1Q6IN84 353 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CYP20A1Q6UW02 462 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 ARSGQ96EG1 525 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 DTNBP1Q96EV8 351 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 GNRHR2Q96P88 292 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 UCN2Q96RP3 112 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 RBBP8Q99708 897 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 PIP5K1AQ99755 562 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 RBM24Q9BX46 236 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 PIGMQ9H3S5 423 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 DDX31Q9H8H2 851 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CAB39LQ9H9S4 337 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms