RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HYAL2Q12891 473 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 GPRC6AQ5T6X5 926 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 PGBD2Q6P3X8 592 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 IKBIPQ70UQ0 350 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 C10orf53Q8N6V4 93 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 MOSPD2Q8NHP6 518 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 C1orf216Q8TAB5 229 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 RAET1EQ8TD07 263 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 TRMT61AQ96FX7 289 aaKnown RBP10.38□□□□□ -0.75
PALB2-206ENST00000568219 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 FNIP2Q9P278 1114 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 RASD1Q9Y272 281 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 UTRNP46939 3433 aa10.38□□□□□ -0.75
PALB2-206ENST00000568219 A0A0G2JPF8 293 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 HYKKA2RU49 373 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 HNRNPCL3B7ZW38 293 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ANHXE9PGG2 379 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 HNRNPCL4P0DMR1 293 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 JUPP14923 745 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ACRV1P26436 265 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ETV5P41161 510 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 ETV1P50549 477 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 GMFBP60983 142 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SNRPD1P62314 119 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 RGS1Q08116 209 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ZNF763Q0D2J5 394 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ZNF79Q15937 498 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 HYAL4Q2M3T9 481 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SLC27A4Q6P1M0 643 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 FAHD1Q6P587 224 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 C17orf107Q6ZR85 190 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 DNAJB7Q7Z6W7 309 aaPredicted RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 OR52L1Q8NGH7 329 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SLC25A46Q96AG3 418 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 KATNB1Q9BVA0 655 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 PIGUQ9H490 435 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 CD93Q9NPY3 652 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 TMEM45AQ9NWC5 275 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ALPK2Q86TB3 2170 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 A0A1W2PPL8 197 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 LEUTXA8MZ59 168 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SMAD6O43541 496 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 PRMT3O60678 531 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 F2P00734 622 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 C8orf89P0DMQ9 161 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 GRK1Q15835 563 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 HSD17B12Q53GQ0 312 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ADGRF1Q5T601 910 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 RAET1GQ6H3X3 334 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 TMEM220Q6QAJ8 160 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 UNC5DQ6UXZ4 953 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 Q6ZVL8 140 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 CDK20Q8IZL9 346 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SLC5A11Q8WWX8 675 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SUSD3Q96L08 255 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 DCLRE1CQ96SD1 692 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 THSD1Q9NS62 852 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 PHF11Q9UIL8 331 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 GNB5O14775 395 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 CNMDO75829 334 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SPDEFO95238 335 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 SLC16A8O95907 504 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 STAT5AP42229 794 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 GIPRP48546 466 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 CSNK1DP48730 415 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 LASP1Q14847 261 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 LRIF1Q5T3J3 769 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ARL14EPQ8N8R7 260 aaPredicted RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 OR7G3Q8NG95 312 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ANGPTL6Q8NI99 470 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 DOK4Q8TEW6 326 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ZBED3Q96IU2 234 aaPredicted RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 EGLN3Q9H6Z9 239 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 ASAH2Q9NR71 780 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 TAS2R3Q9NYW6 316 aa10.37□□□□□ -0.75
PALB2-206ENST00000568219 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.37□□□□□ -0.75
PALB2-206ENST00000568219 A0A0A6YYJ9 748 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PROM1O43490 865 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 URODP06132 367 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 HOXD9P28356 352 aaPredicted RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 ETV6P41212 452 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 EXOSC2Q13868 293 aaKnown RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 ZBTB37Q5TC79 503 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
PALB2-206ENST00000568219 WRAP53Q9BUR4 548 aaKnown RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 ACER3Q9NUN7 267 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 IMP3Q9NV31 184 aaKnown RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 PLAGL1Q9UM63 463 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 CACNG2Q9Y698 323 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 DNAJC25-GNG10A0A024R161 153 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PRKYO43930 277 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 TFP02787 698 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms