RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IFT88Q13099 833 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 RPS6KA2Q15349 733 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 NTRK2Q16620 822 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 ERCC6LQ2NKX8 1250 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 C18orf63Q68DL7 685 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 MRM1Q6IN84 353 aaKnown RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 GOLGA7Q7Z5G4 137 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 PACS2Q86VP3 889 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 CNPY4Q8N129 248 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 LRRC25Q8N386 305 aaPredicted RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 MMGT1Q8N4V1 131 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 C17orf47Q8NEP4 570 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 SREK1Q8WXA9 508 aaKnown RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 JSRP1Q96MG2 331 aaPredicted RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 ALKBH4Q9NXW9 302 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 ADAM29Q9UKF5 820 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 FBN2P35556 2912 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 CCDC168Q8NDH2 2452 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 DCHS2Q6V1P9 2916 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 F8P00451 2351 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 AHRRA9YTQ3 701 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 KRT38O76015 456 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 GLI4P10075 376 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 CNTFP26441 200 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 GDF1P27539 372 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 BSGP35613 385 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 EBPQ15125 230 aaKnown RBP17.13■□□□□ 0.33
LINC01238-205ENST00000567549 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 LRRN4CLQ8ND94 238 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 OR7G1Q8NGA0 311 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 OR4K14Q8NGD5 310 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 NEIL3Q8TAT5 605 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 DIO2Q92813 273 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 SORBS1Q9BX66 1292 aaKnown RBP17.13■□□□□ 0.33
LINC01238-205ENST00000567549 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 VPS11Q9H270 941 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 ACSS3Q9H6R3 686 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 SH2D2AQ9NP31 389 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 NPDC1Q9NQX5 325 aaPredicted RBP17.13■□□□□ 0.33
LINC01238-205ENST00000567549 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
LINC01238-205ENST00000567549 PSME2Q9UL46 239 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 ASB4Q9Y574 426 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 LIPGQ9Y5X9 500 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 CHCHD2Q9Y6H1 151 aaPredicted RBP17.13■□□□□ 0.33
LINC01238-205ENST00000567549 PDZD2O15018 2839 aa17.13■□□□□ 0.33
LINC01238-205ENST00000567549 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 DVL2O14641 736 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 STX16O14662 325 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 AIFM1O95831 613 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 COL6A2P12110 1019 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 MASP1P48740 699 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 IRF9Q00978 393 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 GUCY2DQ02846 1103 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 GLE1Q53GS7 698 aaKnown RBP17.12■□□□□ 0.33
LINC01238-205ENST00000567549 PRAMEF20Q5VT98 475 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 FRG2Q64ET8 278 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 ZDHHC24Q6UX98 284 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 WDR20Q8TBZ3 569 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
LINC01238-205ENST00000567549 HSPBAP1Q96EW2 488 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 FRG2BQ96QU4 278 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 NTMT1Q9BV86 223 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 ELOVL6Q9H5J4 265 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
LINC01238-205ENST00000567549 TNFRSF10DQ9UBN6 386 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 FAM215AQ9Y5M1 114 aa17.12■□□□□ 0.33
LINC01238-205ENST00000567549 A0A1W2PR48 441 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 EEDO75530 441 aaKnown RBP17.11■□□□□ 0.33
LINC01238-205ENST00000567549 NADKO95544 446 aaPredicted RBP17.11■□□□□ 0.33
LINC01238-205ENST00000567549 NR0B1P51843 470 aaKnown RBP17.11■□□□□ 0.33
LINC01238-205ENST00000567549 CCNYL2Q5T2Q4 361 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
LINC01238-205ENST00000567549 RELL1Q8IUW5 271 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 RPRMLQ8N4K4 120 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 PTGR2Q8N8N7 351 aaPredicted RBP17.11■□□□□ 0.33
LINC01238-205ENST00000567549 OR10G3Q8NGC4 313 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 NFU1Q9UMS0 254 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 SNX6Q9UNH7 406 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 RNF11Q9Y3C5 154 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 NPFFR2Q9Y5X5 522 aa17.11■□□□□ 0.33
LINC01238-205ENST00000567549 C15orf38-AP3S2A0A0A6YYH1 394 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 A0A0G2JNJ9 132 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 C1orf226A1L170 272 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 GLOD5A6NK44 160 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 TMPRSS11DO60235 418 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 ZNF354AO60765 605 aaPredicted RBP17.1■□□□□ 0.33
LINC01238-205ENST00000567549 OTCP00480 354 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 IL2RAP01589 272 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 NAGAP17050 411 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 MAPK12P53778 367 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 GGTA1PQ4G0N0 100 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 TECRLQ5HYJ1 363 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 LGSNQ5TDP6 509 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 SCIMPQ6UWF3 145 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 LYPD8Q6UX82 237 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 LACC1Q8IV20 430 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 ULK2Q8IYT8 1036 aa17.1■□□□□ 0.33
LINC01238-205ENST00000567549 FAIM2Q9BWQ8 316 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms