RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RIT2Q99578 217 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 CHP1Q99653 195 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC39A3Q9BRY0 314 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 NDUFAF3Q9BU61 184 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RBM24Q9BX46 236 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ROGDIQ9GZN7 287 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 GLT8D2Q9H1C3 349 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM124BQ9H5Z6 455 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF703Q9H7S9 590 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ANKRA2Q9H9E1 313 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 PELI2Q9HAT8 420 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 C3orf14Q9HBI5 128 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF160Q9HCG1 818 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 POLE4Q9NR33 117 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 MRPL22Q9NWU5 206 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM120CQ9NX05 1096 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SYBUQ9NX95 663 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TECRQ9NZ01 308 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC17A6Q9P2U8 582 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF175Q9Y473 711 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 RIPK3Q9Y572 518 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 KLF2Q9Y5W3 355 aaPredicted RBP3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 TAF1P21675 1872 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 FANCD2Q9BXW9 1451 aa3.02□□□□□ -1.93
HERPUD1-211ENST00000566550 PREX1Q8TCU6 1659 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PDS5AQ29RF7 1337 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RNF123Q5XPI4 1314 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CENPJQ9HC77 1338 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ESYT2A0FGR8 921 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 LINC01553A4QN01 128 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GAGE12JA6NER3 117 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 A8MVM7 634 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PRR32B1ATL7 298 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GOLGA8TH3BQL2 631 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CLDN5O00501 218 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SH2D1BO14796 132 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CETN3O15182 167 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CFLARO15519 480 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RNF113AO15541 343 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 TIMM8AO60220 97 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CIDEAO60543 219 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GLRA3O75311 464 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ANXA9O76027 345 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 NDUFB8O95169 186 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 NDUFA7O95182 113 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 NUDT3O95989 172 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 HPRP00739 348 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 IFNA2P01563 188 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 KRT14P02533 472 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ATP1B1P05026 303 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ERVK-10P10266 1014 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CTSAP10619 480 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PRF1P14222 555 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GP9P14770 177 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ARSBP15848 533 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ITGA2P17301 1181 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 TUBG1P23258 451 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PSMA2P25787 234 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 LAP3P28838 519 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RBMS1P29558 406 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 MATKP42679 507 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ALDH3B1P43353 468 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 MAGEA5P43359 124 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CDKN1BP46527 198 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RFX5P48382 616 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RARRES1P49788 294 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RAG2P55895 527 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 OSTNP61366 133 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 BTG1P62324 171 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PPIAP62937 165 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ABATP80404 500 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 GPR50Q13585 617 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 HNRNPDQ14103 355 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF234Q14588 700 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 KRT71Q3SY84 523 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM76BQ5HYJ3 339 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CEP78Q5JTW2 689 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC35D3Q5M8T2 416 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CTSL3PQ5NE16 218 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 FNBP1LQ5T0N5 605 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PDZK1Q5T2W1 519 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 DCAF12Q5T6F0 453 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 OTUD1Q5VV17 481 aaPredicted RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PAPD7Q5XG87 772 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM122CQ6P4D5 195 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM171BQ6P995 826 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 UQCC3Q6UW78 93 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 LINGO4Q6UY18 593 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CCDC80Q76M96 950 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 Q7L0L9 218 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 BZW1Q7L1Q6 419 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PIWIL4Q7Z3Z4 852 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 LUZP2Q86TE4 346 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 ACOT1Q86TX2 421 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 PAQR7Q86WK9 346 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CCDC36Q8IYA8 594 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 RNF113BQ8IZP6 322 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 CENPSQ8N2Z9 138 aa3.01□□□□□ -1.93
HERPUD1-211ENST00000566550 KBTBD8Q8NFY9 601 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms