RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 KIR2DL3P43628 341 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 ALDH18A1P54886 795 aaKnown RBP13.61□□□□□ -0.23
IFT140-207ENST00000566052 PLTPP55058 493 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 PHEXP78562 749 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 ACAP2Q15057 778 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 PCBP2Q15366 365 aaKnown RBP eCLIP13.61□□□□□ -0.23
IFT140-207ENST00000566052 FAM83EQ2M2I3 478 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 POMZP3Q6PJE2 187 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 WDR53Q7Z5U6 358 aaPredicted RBP13.61□□□□□ -0.23
IFT140-207ENST00000566052 L3MBTL4Q8NA19 623 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 FBF1Q8TES7 1133 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 KCTD4Q8WVF5 259 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 SECISBP2Q96T21 854 aaKnown RBP13.61□□□□□ -0.23
IFT140-207ENST00000566052 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 UBQLN3Q9H347 655 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 CXorf21Q9HAI6 301 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 PRM3Q9NNZ6 103 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 ZNF358Q9NW07 568 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 ANGPTL3Q9Y5C1 460 aa13.61□□□□□ -0.23
IFT140-207ENST00000566052 DOCK7Q96N67 2140 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 C2orf92A0A1B0GVN3 265 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 HMX2A2RU54 273 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 GLOD5A6NK44 160 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 CAPN14A8MX76 684 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 TP53I11O14683 189 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 KRT38O76015 456 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 SEMA3DO95025 777 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 AIFM1O95831 613 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 HPNP05981 417 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 C2P06681 752 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 TIMP3P35625 211 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 PIK3CGP48736 1102 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 CRYZQ08257 329 aaKnown RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 FUT7Q11130 342 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 DUSP8Q13202 625 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 RPS6KA2Q15349 733 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 PFKFB4Q16877 469 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 TMEM198Q66K66 360 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 CYP20A1Q6UW02 462 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 NUDT13Q86X67 352 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 MYLK4Q86YV6 388 aaPredicted RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 ZZZ3Q8IYH5 903 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 LIX1Q8N485 282 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 RELL2Q8NC24 303 aaPredicted RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 NAXEQ8NCW5 288 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 DOK4Q8TEW6 326 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 DIO2Q92813 273 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 ZNF597Q96LX8 424 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 GPR78Q96P69 363 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 TIMP4Q99727 224 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 SH3GL2Q99962 352 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 ANGPTL4Q9BY76 406 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 POLDIP3Q9BY77 421 aaKnown RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 WDR41Q9HAD4 459 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 SNX15Q9NRS6 342 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 RASSF1Q9NS23 344 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 ST6GALNAC2Q9UJ37 374 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 RNF11Q9Y3C5 154 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 TNPO3Q9Y5L0 923 aaKnown RBP13.6□□□□□ -0.23
IFT140-207ENST00000566052 NAV3Q8IVL0 2385 aa13.6□□□□□ -0.23
IFT140-207ENST00000566052 DVL2O14641 736 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 PGRMC2O15173 223 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 KLHL2O95198 593 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 SNX4O95219 450 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 GFAPP14136 432 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 GDF1P27539 372 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 SSTR4P31391 388 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 TRPC1P48995 793 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 ASCL1P50553 236 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 IRF9Q00978 393 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 CPSF6Q16630 551 aaKnown RBP eCLIP13.59□□□□□ -0.23
IFT140-207ENST00000566052 ACSF3Q4G176 576 aaPredicted RBP13.59□□□□□ -0.23
IFT140-207ENST00000566052 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 VASNQ6EMK4 673 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 LACC1Q8IV20 430 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 ZNF615Q8N8J6 731 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 C17orf47Q8NEP4 570 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 SPPL2AQ8TCT8 520 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 UCN3Q969E3 161 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 JSRP1Q96MG2 331 aaPredicted RBP13.59□□□□□ -0.23
IFT140-207ENST00000566052 CRIM1Q9NZV1 1036 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
IFT140-207ENST00000566052 UTP11Q9Y3A2 253 aaKnown RBP13.59□□□□□ -0.23
IFT140-207ENST00000566052 NPFFR2Q9Y5X5 522 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
IFT140-207ENST00000566052 LRRC14BA6NHZ5 514 aa13.58□□□□□ -0.24
IFT140-207ENST00000566052 LRATO95237 230 aa13.58□□□□□ -0.24
IFT140-207ENST00000566052 CLDN9O95484 217 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms