RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DTNAQ9Y4J8 743 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 HS3ST3B1Q9Y662 390 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 MRPS18BQ9Y676 258 aaKnown RBP11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PCSK5Q92824 1860 aa11.83□□□□□ -0.52
SF3B3-206ENST00000565990 PRSS51A0A1B0GVH4 220 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 SYNDIG1LA6NDD5 238 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 SOCS6O14544 535 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 UBDO15205 165 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 FGF17O60258 216 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 CDC123O75794 336 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PPP2R1BP30154 601 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 GALNSP34059 522 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 NUDT2P50583 147 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 TLE3Q04726 772 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 SLC13A2Q13183 592 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 IL10RAQ13651 578 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 SERTAD2Q14140 314 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 FLOT2Q14254 428 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PTGR1Q14914 329 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 NSDHLQ15738 373 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 MINDY4Q4G0A6 757 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 TMEM198Q66K66 360 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 CPZQ66K79 652 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 KIRREL2Q6UWL6 708 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PRSS58Q8IYP2 241 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 MMP21Q8N119 569 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 OR4K14Q8NGD5 310 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 TSPEARQ8WU66 669 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 LRGUKQ96M69 825 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 TSSK3Q96PN8 268 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 CRB3Q9BUF7 120 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 ALOXE3Q9BYJ1 711 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 REEP4Q9H6H4 257 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 PAPOLBQ9NRJ5 636 aaKnown RBP11.82□□□□□ -0.52
SF3B3-206ENST00000565990 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 RAXQ9Y2V3 346 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 COMMD3-BMI1R4GMX3 469 aa11.82□□□□□ -0.52
SF3B3-206ENST00000565990 CELSR3Q9NYQ7 3312 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 GLOD5A6NK44 160 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 ENO4A6NNW6 628 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 NKX2-8O15522 239 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 LDB3O75112 727 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 C8BP07358 591 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 SLC35E2P0CK97 266 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 C8orf89P0DMQ9 161 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 IDO1P14902 403 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CSNK2A2P19784 350 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 MAOAP21397 527 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 GPX3P22352 226 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 RPL3P39023 403 aaKnown RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 FRKP42685 505 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CHN2P52757 468 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 FOLH1Q04609 750 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 TRIP10Q15642 601 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 MMEL1Q495T6 779 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 COQ5Q5HYK3 327 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 NXNQ6DKJ4 435 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 R3HCC1LQ7Z5L2 792 aaKnown RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CPEB2Q7Z5Q1 589 aaKnown RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CAMKMTQ7Z624 323 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 HPS6Q86YV9 775 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 OR4N5Q8IXE1 308 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 STARD8Q92502 1023 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 ROPN1LQ96C74 230 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 ASB9Q96DX5 294 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 DTNBP1Q96EV8 351 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CNRIP1Q96F85 164 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 IP6K3Q96PC2 410 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 WDR77Q9BQA1 342 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 SLC25A23Q9BV35 468 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 RBCK1Q9BYM8 510 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 MUC13Q9H3R2 512 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 SLC35C2Q9NQQ7 365 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 PPIEQ9UNP9 301 aaKnown RBP11.81□□□□□ -0.52
SF3B3-206ENST00000565990 CHD8Q9HCK8 2581 aa11.81□□□□□ -0.52
SF3B3-206ENST00000565990 NUP214P35658 2090 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 LOC100653049A0A140TA62 436 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 MYO1GB0I1T2 1018 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 KRT34O76011 436 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 PDE5AO76074 875 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 STAMBPO95630 424 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 STT3AP46977 705 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 ZFP36L2P47974 494 aaKnown RBP11.8□□□□□ -0.52
SF3B3-206ENST00000565990 GPR143P51810 404 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 XKP51811 444 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 UFM1P61960 85 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 STX4Q12846 297 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 PDK3Q15120 406 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 SFT2D3Q587I9 215 aa11.8□□□□□ -0.52
SF3B3-206ENST00000565990 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms