RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HOXD4P09016 255 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 FBXO45P0C2W1 286 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 CPMP14384 443 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 GABRA1P14867 456 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 CSNK2A2P19784 350 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 CNTFP26441 200 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 GDF1P27539 372 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 HSD17B3P37058 310 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FEN1P39748 380 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 ZFP36L2P47974 494 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 MASP1P48740 699 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ALDH9A1P49189 494 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FBXW4P57775 412 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 KRTAP10-9P60411 292 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 RPP38P78345 283 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 EBPQ15125 230 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 HYAL4Q2M3T9 481 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 SPRED3Q2MJR0 410 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 C1orf185Q5T7R7 199 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 CES4AQ5XG92 561 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 OR52E8Q6IFG1 317 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 LYPD8Q6UX82 237 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 WDR53Q7Z5U6 358 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 GALNT12Q8IXK2 581 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 IFT20Q8IY31 132 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FBXW8Q8N3Y1 598 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 NOA1Q8NC60 698 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 MYRIPQ8NFW9 859 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 TM4SF18Q96CE8 201 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 GNRHR2Q96P88 292 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ZNF559Q9BR84 538 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FAIM2Q9BWQ8 316 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ZNF717Q9BY31 904 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 MRPL46Q9H2W6 279 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 CXorf21Q9HAI6 301 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 MCCC2Q9HCC0 563 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ZBTB26Q9HCK0 441 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ACKR4Q9NPB9 350 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 PFDN4Q9NQP4 134 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FARSBQ9NSD9 589 aaKnown RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 TEX10Q9NXF1 929 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 ADAM29Q9UKF5 820 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 PCTPQ9UKL6 214 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 NFU1Q9UMS0 254 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 PCDHA9Q9Y5H5 950 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 CHCHD2Q9Y6H1 151 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 ZNF780BQ9Y6R6 833 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 ESPL1Q14674 2120 aa5.9□□□□□ -1.47
TCF4-228ENST00000565393 CROCCQ5TZA2 2017 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 SNRNP200O75643 2136 aaKnown RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 SEC16AO15027 2179 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 DOPEY2Q9Y3R5 2298 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 A0A0G2JNJ9 132 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 A0A1B0GTL3 188 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 EXOC1LA0A1B0GW35 172 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 A0A1W2PS29 197 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 ANKRD33BA6NCL7 494 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 HSPB2A8KAH6 182 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 FAM47E-STBD1D6RA91 191 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 GOLGA8RI6L899 631 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 GNB5O14775 395 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 ULK1O75385 1050 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 SEMA3DO95025 777 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 KRT6AP02538 564 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 KRT6BP04259 564 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 CT62P0C5K7 136 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 POU3F2P20265 443 aaPredicted RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 IMPDH1P20839 514 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 HMOX2P30519 316 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 CASP3P42574 277 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 KRT6CP48668 564 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 TMED10P49755 219 aaKnown RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 CLCQ05315 142 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 BTKQ06187 659 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 FUT7Q11130 342 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 MAP4K2Q12851 820 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 DUSP8Q13202 625 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 MYBPHQ13203 477 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 SF3B4Q15427 424 aaKnown RBP eCLIP5.89□□□□□ -1.472e-6■■■■■ 28.8
TCF4-228ENST00000565393 HSPB2Q16082 182 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 NTRK2Q16620 822 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 TRMT12Q53H54 448 aaKnown RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 SPDYAQ5MJ70 313 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 TBCELQ5QJ74 424 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 C10orf62Q5T681 223 aaPredicted RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 RTL6Q6ICC9 239 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 FAM180BQ6P0A1 224 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 SLC48A1Q6P1K1 146 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 FAM111BQ6SJ93 734 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 NUP54Q7Z3B4 507 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 COMMD6Q7Z4G1 85 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 TMEM200AQ86VY9 491 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 LIX1LQ8IVB5 337 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 DMRTC2Q8IXT2 367 aaPredicted RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 CCDC116Q8IYX3 515 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 LRRC25Q8N386 305 aaPredicted RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 METTL4Q8N3J2 472 aa5.89□□□□□ -1.47
TCF4-228ENST00000565393 C1orf52Q8N6N3 182 aaKnown RBP5.89□□□□□ -1.47
TCF4-228ENST00000565393 ZNF615Q8N8J6 731 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms