RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 C16orf58Q96GQ5 468 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HIPK2Q9H2X6 1198 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CARS2Q9HA77 564 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 BRF2Q9HAW0 419 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC39A9Q9NUM3 307 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FAM118AQ9NWS6 357 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 OXSMQ9NWU1 459 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 GEMIN8Q9NWZ8 242 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 KCNN3Q9UGI6 736 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 NEUROG3Q9Y4Z2 214 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SCN10AQ9Y5Y9 1956 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TAPBPO15533 448 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TGOLN2O43493 480 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CDK14O94921 469 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FSBPO95073 299 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ATE1O95260 518 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 WISP3O95389 354 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 FUCA1P04066 466 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 LPOP22079 712 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 CCR7P32248 378 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CPOXP36551 454 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PRPS1P60891 318 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PPP1CAP62136 330 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 DEFB110Q30KQ9 67 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RPS26P11Q5JNZ5 115 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 LIPMQ5VYY2 423 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 GLT8D1Q68CQ7 371 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 GCNT7Q6ZNI0 430 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 Q6ZS52 159 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SHISA6Q6ZSJ9 500 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF550Q7Z398 422 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MARCH9Q86YJ5 346 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TRAPPC5Q8IUR0 188 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZZZ3Q8IYH5 903 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 OR4C6Q8NH72 309 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TERB2Q8NHR7 220 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SETD6Q8TBK2 473 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC39A13Q96H72 371 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC29A1Q99808 456 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 P2RY13Q9BPV8 354 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 DCUN1D5Q9BTE7 237 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SPRTNQ9H040 489 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 NIPAL2Q9H841 368 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SRA1Q9HD15 236 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 EQTNQ9NQ60 294 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HEBP1Q9NRV9 189 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TAS2R9Q9NYW1 312 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SPG21Q9NZD8 308 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 KCNIP3Q9Y2W7 256 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MTCL1Q9Y4B5 1905 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 GNG14A0A1W2PPG7 69 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 EFCAB10A6NFE3 127 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 LOC730098B7Z3J9 87 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SEC22BO75396 215 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 IFNA5P01569 189 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HMGN1P05114 100 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MTHFD2P13995 350 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CDK2P24941 298 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CD40LGP29965 261 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CTBSQ01459 385 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC9A5Q14940 896 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SMAD2Q15796 467 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 NNATQ16517 81 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 DMRTC1Q5HYR2 192 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 EOGTQ5NDL2 527 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CAPN13Q6MZZ7 669 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 TCTE3Q8IZS6 198 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF548Q8NEK5 533 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 KCTD12Q96CX2 325 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF597Q96LX8 424 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PTCHD1Q96NR3 888 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ERMAPQ96PL5 475 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC19A3Q9BZV2 496 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 REEP1Q9H902 201 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 POMPQ9Y244 141 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PEX16Q9Y5Y5 336 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 EDDM13A0A1B0GTR0 161 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 A0A1W2PPC1 479 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 E7EQ34 232 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 GFRA2O00451 464 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SOCS2O14508 198 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 POP4O95707 220 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 TGM6O95932 706 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 NUDT7P0C024 238 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ANXA7P20073 488 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 POU3F3P20264 500 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 PRPS1L1P21108 318 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TUBG1P23258 451 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 EPHA2P29317 976 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SMSP52788 366 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PRKAG1P54619 331 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 GPR17Q13304 367 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MRPL10Q7Z7H8 261 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 RETREG3Q86VR2 466 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 OR4N5Q8IXE1 308 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HDDC3Q8N4P3 179 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TMEM125Q96AQ2 219 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CIDECQ96AQ7 238 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 FOXRED1Q96CU9 486 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 TPD52L3Q96J77 140 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms