RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 FAM210AQ96ND0 272 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ELAC2Q9BQ52 826 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 FAM107BQ9H098 131 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 GLIPR2Q9H4G4 154 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ATP13A2Q9NQ11 1180 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 NUP214P35658 2090 aaPredicted RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 ATRXP46100 2492 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 SNX3O60493 162 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 SCN2BO60939 215 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 SLC22A3O75751 556 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 CLPSP04118 112 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 TNNI3P19429 210 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 EFNA1P20827 205 aaPredicted RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 PGDP52209 483 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 MAP4K2Q12851 820 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 AIMP2Q13155 320 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 TBR1Q16650 682 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 SPRED3Q2MJR0 410 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 TRMT12Q53H54 448 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 SPANXN4Q5MJ08 99 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 CPTPQ5TA50 214 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 PAOXQ6QHF9 649 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 FAM111BQ6SJ93 734 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ZNF551Q7Z340 670 aaPredicted RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 FUNDC1Q8IVP5 155 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 KIF2BQ8N4N8 673 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 CLEC1AQ8NC01 280 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 OR8J2Q8NGG1 315 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 OR9A2Q8NGT5 310 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 OR14A16Q8NHC5 309 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 APOBEC4Q8WW27 367 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 EXTL1Q92935 676 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 FBXL20Q96IG2 436 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 VPS50Q96JG6 964 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 PELOQ9BRX2 385 aaKnown RBP11.62□□□□□ -0.55
KARS-204ENST00000564578 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 RABEP2Q9H5N1 569 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ANKRA2Q9H9E1 313 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 MAT2BQ9NZL9 334 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ZNF639Q9UID6 485 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 ENTPD4Q9Y227 616 aa11.62□□□□□ -0.55
KARS-204ENST00000564578 BSNQ9UPA5 3926 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 PDPK1O15530 556 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 SERPINA7P05543 415 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 ITGAMP11215 1152 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 PCSK2P16519 638 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 NT5EP21589 574 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 NCBP2P52298 156 aaKnown RBP eCLIP11.61□□□□□ -0.55
KARS-204ENST00000564578 RRADP55042 308 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 FUT7Q11130 342 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 ZNF267Q14586 743 aaPredicted RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 RPS6KA2Q15349 733 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 EXT1Q16394 746 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 FAM174BQ3ZCQ3 159 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 ZNF628Q5EBL2 1059 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 GPR155Q7Z3F1 870 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 SPATA21Q7Z572 469 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 CPLX4Q7Z7G2 160 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 GALNT12Q8IXK2 581 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 MIER2Q8N344 545 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 MORN4Q8NDC4 146 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 OR1N1Q8NGS0 311 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 M1APQ8TC57 530 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 NCLNQ969V3 563 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 BBS4Q96RK4 519 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 PRPF18Q99633 342 aaKnown RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 OR8D2Q9GZM6 311 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 EPN3Q9H201 632 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 ACSS1Q9NUB1 689 aaPredicted RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
KARS-204ENST00000564578 SMG1Q96Q15 3661 aaKnown RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
KARS-204ENST00000564578 PRKNO60260 465 aaPredicted RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 CEACAM4O75871 244 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ITGB2P05107 769 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ICAM2P13598 275 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 SSTR4P31391 388 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 CCL11P51671 97 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 DGKQP52824 942 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 SRSF11Q05519 484 aaKnown RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 DUSP8Q13202 625 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 PGS1Q32NB8 556 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 OR4F3Q6IEY1 312 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 VWA5B2Q8N398 1253 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 GALNT16Q8N428 558 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 ZNF675Q8TD23 568 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 KAT2AQ92830 837 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 THOC3Q96J01 351 aaKnown RBP11.6□□□□□ -0.55
KARS-204ENST00000564578 DUSP26Q9BV47 211 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 CNPPD1Q9BV87 410 aa11.6□□□□□ -0.55
KARS-204ENST00000564578 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms