RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RIPK2O43353 540 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 SUPT7LO94864 414 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 CLPSP04118 112 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 ABHD2P08910 425 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 CT62P0C5K7 136 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 GCAP28676 217 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 SERPINB3P29508 390 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 KIR3DL1P43629 444 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 XKP51811 444 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 FOXO1Q12778 655 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 TCHHL1Q5QJ38 904 aaPredicted RBP16.29■□□□□ 0.2
NME3-205ENST00000563854 C10orf62Q5T681 223 aaPredicted RBP16.29■□□□□ 0.2
NME3-205ENST00000563854 TRMT10CQ7L0Y3 403 aaKnown RBP16.29■□□□□ 0.2
NME3-205ENST00000563854 GSPT2Q8IYD1 628 aaKnown RBP16.29■□□□□ 0.2
NME3-205ENST00000563854 TAGAPQ8N103 731 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 MMP21Q8N119 569 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 METTL4Q8N3J2 472 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 CDYL2Q8N8U2 506 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 RND1Q92730 232 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 MTBPQ96DY7 904 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 CXorf21Q9HAI6 301 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 TMEM216Q9P0N5 145 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 ADAM29Q9UKF5 820 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 BOKQ9UMX3 212 aaPredicted RBP16.29■□□□□ 0.2
NME3-205ENST00000563854 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
NME3-205ENST00000563854 ERAL1O75616 437 aaKnown RBP16.28■□□□□ 0.2
NME3-205ENST00000563854 FBXO45P0C2W1 286 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 GALNSP34059 522 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
NME3-205ENST00000563854 ALDH9A1P49189 494 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 CLCQ05315 142 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 PMPCAQ10713 525 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 SLC10A1Q14973 349 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 GXYLT1Q4G148 440 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 EMC4Q5J8M3 183 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 ADGRD1Q6QNK2 874 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 TRILQ7L0X0 811 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
NME3-205ENST00000563854 PRR22Q8IZ63 422 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 FBXW8Q8N3Y1 598 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 PAQR8Q8TEZ7 354 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 TMEM237Q96Q45 408 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 TRPS1Q9UHF7 1281 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 ACAD8Q9UKU7 415 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 RNF6Q9Y252 685 aa16.28■□□□□ 0.2
NME3-205ENST00000563854 FIGNL2A6NMB9 653 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 BCKDKO14874 412 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 GUCY1B2O75343 617 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 ESRRBO95718 433 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 IGHG3P01860 377 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 CPMP14384 443 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 PORP16435 677 aaPredicted RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 HSD17B3P37058 310 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 FEN1P39748 380 aaKnown RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 NUP107P57740 925 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 FBXW4P57775 412 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 GALNT1Q10472 559 aaPredicted RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 NNATQ16517 81 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 ZNF678Q5SXM1 525 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 MEX3BQ6ZN04 569 aaKnown RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 DND1Q8IYX4 353 aaKnown RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 TMEM151AQ8N4L1 468 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 C1orf52Q8N6N3 182 aaKnown RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 OR10Q1Q8NGQ4 319 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 ASB5Q8WWX0 329 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 DIO2Q92813 273 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 KLHL29Q96CT2 875 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 TRIM8Q9BZR9 551 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 OR10A5Q9H207 317 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 ZNF703Q9H7S9 590 aaPredicted RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 SH2D2AQ9NP31 389 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 PFDN4Q9NQP4 134 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 ALKBH4Q9NXW9 302 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 CNIH4Q9P003 139 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 TBK1Q9UHD2 729 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 PCDHA9Q9Y5H5 950 aa16.27■□□□□ 0.2
NME3-205ENST00000563854 CHCHD2Q9Y6H1 151 aaPredicted RBP16.27■□□□□ 0.2
NME3-205ENST00000563854 TRGV5A0A0B4J1U4 118 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 C1orf226A1L170 272 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 NKX2-6A6NCS4 301 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 OR14I1A6ND48 311 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 GOLGA6L10A6NI86 522 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 MANBAO00462 879 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 AQP7O14520 342 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 DLX3O60479 287 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 KRT6AP02538 564 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 KRT6BP04259 564 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 RFPL3SP0C7P2 107 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 ACVR2AP27037 513 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 HMOX2P30519 316 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 CHRNB4P30926 498 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 KRT6CP48668 564 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 TRPC1P48995 793 aa16.26■□□□□ 0.19
NME3-205ENST00000563854 TBL3Q12788 808 aaKnown RBP16.26■□□□□ 0.19
NME3-205ENST00000563854 SLC29A2Q14542 456 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms