RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PROK2Q9HC23 129 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 IGSF5Q9NSI5 407 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 WHRNQ9P202 907 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 PCDHGB3Q9Y5G1 929 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 A0A1W2PR48 441 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 FAM221AA4D161 298 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 AHRRA9YTQ3 701 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 TRIM3O75382 744 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-202ENST00000562722 AIFM1O95831 613 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 C1QAP02745 245 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 GBAP04062 536 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 GSTA2P09210 222 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 KRT15P19012 456 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 TACR1P25103 407 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 SSTR4P31391 388 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 STX2P32856 288 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 TMED10P49755 219 aaKnown RBP11.91□□□□□ -0.5
SF3B3-202ENST00000562722 NRG3P56975 720 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 FBXW4P57775 412 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 GPX6P59796 221 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 RPP38P78345 283 aaKnown RBP11.91□□□□□ -0.5
SF3B3-202ENST00000562722 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
SF3B3-202ENST00000562722 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.57e-7■■■■■ 28.3
SF3B3-202ENST00000562722 PFKFB4Q16877 469 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 LIPJQ5W064 366 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 BICRALQ6AI39 1079 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 OR52E8Q6IFG1 317 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 NUDT13Q86X67 352 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 LACC1Q8IV20 430 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 GALNT12Q8IXK2 581 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 PM20D2Q8IYS1 436 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 NAXEQ8NCW5 288 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 KCTD4Q8WVF5 259 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 NXNL1Q96CM4 212 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 SNX15Q9NRS6 342 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 TEX10Q9NXF1 929 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-202ENST00000562722 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 CAMK2AQ9UQM7 478 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 ACOT9Q9Y305 439 aa11.91□□□□□ -0.5
SF3B3-202ENST00000562722 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 A0A0A6YYD5 115 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 ANKRD33BA6NCL7 494 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 KDM4EB2RXH2 506 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 EEF1E1-BLOC1S5C9J1V9 151 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 EEF1E1O43324 174 aaKnown RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 TMPRSS11DO60235 418 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SNX4O95219 450 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 ACSL3O95573 720 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 EPPINO95925 133 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SLC35E2P0CK97 266 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 NT5EP21589 574 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 PIK3R1P27986 724 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 BSGP35613 385 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 NEK2P51955 445 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 AGFG1P52594 562 aaKnown RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 ARFIP1P53367 373 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 IRF9Q00978 393 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 PCDH1Q08174 1060 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 FOXD4Q12950 439 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 CBLBQ13191 982 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SETDB1Q15047 1291 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 FAM83EQ2M2I3 478 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 CYS1Q717R9 158 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 PRR22Q8IZ63 422 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SPPL2AQ8TCT8 520 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 FBF1Q8TES7 1133 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 TP53INP1Q96A56 240 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 MRRFQ96E11 262 aaKnown RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 TIMP4Q99727 224 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SH3GL2Q99962 352 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 FOXD3Q9UJU5 478 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-202ENST00000562722 CBLCQ9ULV8 474 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 ASB4Q9Y574 426 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 NPFFR2Q9Y5X5 522 aa11.9□□□□□ -0.5
SF3B3-202ENST00000562722 A0A087X1B8 175 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 H0YIV9 168 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 RAD51CO43502 376 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CLPSP04118 112 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GALNSP34059 522 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GCKP35557 465 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 TIMP3P35625 211 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 PIK3CGP48736 1102 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CDK9P50750 372 aaKnown RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 PLTPP55058 493 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 C2orf54Q08AI8 447 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CUL3Q13618 768 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GTF2H2Q13888 395 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 KEAP1Q14145 624 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 MRM1Q6IN84 353 aaKnown RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GTF2H2CQ6P1K8 395 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 KLC3Q6P597 504 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GOLGA7Q7Z5G4 137 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms