RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PGBD5Q8N414 524 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 FTMTQ8N4E7 242 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 WDSUB1Q8N9V3 476 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 CCNYQ8ND76 341 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 FAM46DQ8NEK8 389 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 OR1S1Q8NH92 325 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 FATE1Q969F0 183 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 RFT1Q96AA3 541 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 MYO19Q96H55 970 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ITCHQ96J02 903 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SUSD3Q96L08 255 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ZNF354BQ96LW1 612 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 UTP23Q9BRU9 249 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 KATNB1Q9BVA0 655 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 IFT27Q9BW83 186 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 NLNQ9BYT8 704 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ELOVL4Q9GZR5 314 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 LMAN2LQ9H0V9 348 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 POLR3FQ9H1D9 316 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 MFSD1Q9H3U5 465 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ACTL8Q9H568 366 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 EXOSC4Q9NPD3 245 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ZFP57Q9NU63 452 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GPATCH2LQ9NWQ4 482 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ASB6Q9NWX5 421 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 MS4A12Q9NXJ0 267 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GPR83Q9NYM4 423 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 STOX2Q9P2F5 926 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 CARHSP1Q9Y2V2 147 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 CFAP20Q9Y6A4 193 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 CUL9Q8IWT3 2517 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PCM1Q15154 2024 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 A0A087WZ62 844 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TRAV19A0A0A6YYK7 116 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMEM129A0AVI4 362 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 LCHNA4D1U4 455 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 SNRPGP15A8MWD9 76 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMEM189-UBE2V1I3L0A0 370 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ARVCFO00192 962 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CACNB4O00305 520 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 CASKO14936 926 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CTDSPLO15194 276 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 RDH16O75452 317 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PAGE1O75459 146 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CRTAPO75718 401 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 KRT33AO76009 404 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NFATC1O95644 943 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PLATP00750 562 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 POMCP01189 267 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 IGHA2P01877 340 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 HRGP04196 525 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PFKMP08237 780 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZNF806P0C7X5 589 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PRPS2P11908 318 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 DRD2P14416 443 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NID1P14543 1247 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 POU2F1P14859 743 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 BPIP17213 487 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GPX2P18283 190 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CD53P19397 219 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 XPAP23025 273 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 PTAFRP25105 342 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CSNK1EP49674 416 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 AGFG1P52594 562 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 CDH4P55283 916 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 KIAA1024LP59773 190 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GMFBP60983 142 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 UBE2IP63279 158 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 FKBP1BP68106 108 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CXADRP78310 365 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 RNF4P78317 190 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 DEFA6Q01524 100 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ACVR1Q04771 509 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 YWHAHQ04917 246 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 IL10RBQ08334 325 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 DUSP4Q13115 394 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 HNRNPA0Q13151 305 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 CTBP1Q13363 440 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TNFAIP1Q13829 316 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GTF2H3Q13889 308 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 BAATQ14032 418 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 GK2Q14410 553 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 MPPED2Q15777 294 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NTRK2Q16620 822 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CDO1Q16878 200 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZRANB3Q5FWF4 1079 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZNF57Q68EA5 555 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 NADSYN1Q6IA69 706 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms