RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MFSD4BQ5TF39 518 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 C1orf189Q5VU69 101 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 PWWP2BQ6NUJ5 590 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 CEACAM20Q6UY09 585 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 CYP2R1Q6VVX0 501 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 B3GNT8Q7Z7M8 397 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 SPPL2CQ8IUH8 684 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ST13P4Q8IZP2 240 aaPredicted RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 METTL27Q8N6F8 245 aaPredicted RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 NUP43Q8NFH3 380 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 SUN3Q8TAQ9 357 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 PNPT1Q8TCS8 783 aaKnown RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 FIG4Q92562 907 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 FAM162AQ96A26 154 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ZNF578Q96N58 590 aaPredicted RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 PTCHD1Q96NR3 888 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DGAT2Q96PD7 388 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DEPDC7Q96QD5 511 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ZPBPQ9BS86 351 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 TMEM38AQ9H6F2 299 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 EPS8L2Q9H6S3 715 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DDX18Q9NVP1 670 aaKnown RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 NTMQ9P121 344 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 RAPGEFL1Q9UHV5 662 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 NEUROG3Q9Y4Z2 214 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 C5orf58C9J3I9 102 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 AGRPO00253 132 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 PLOD3O60568 738 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 CPNE3O75131 537 aaKnown RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 CREG1O75629 220 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 AGR2O95994 175 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 IFNA14P01570 189 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 IFNA16P05015 189 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 GPIP06744 558 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 BMP2P12643 396 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TNNI3P19429 210 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 MATN1P21941 496 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TGM1P22735 817 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 PSMA4P25789 261 aaKnown RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 GALNSP34059 522 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 KHKP50053 298 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 DSTNP60981 165 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 IGLV3-21P80748 117 aaPredicted RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 ID2Q02363 134 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 MAP4K2Q12851 820 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ERV3-1Q14264 604 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 SNCBQ16143 134 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 SYT16Q17RD7 645 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 DCAF12Q5T6F0 453 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 PRAMEF17Q5VTA0 474 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 FBXW10Q5XX13 1052 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ZCCHC12Q6PEW1 402 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TMEM107Q6UX40 140 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 GPR155Q7Z3F1 870 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ZC3H7AQ8IWR0 971 aaKnown RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 ZZZ3Q8IYH5 903 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 EID3Q8N140 333 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 DTWD1Q8N5C7 304 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 METTL25Q8N6Q8 603 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 BMPERQ8N8U9 685 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TMEM52Q8NDY8 209 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 OR52E4Q8NGH9 312 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 OR9A2Q8NGT5 310 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ZNF675Q8TD23 568 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 KAT2AQ92830 837 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 RIT1Q92963 219 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 NCLNQ969V3 563 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 MAGED4Q96JG8 741 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 SLC35G5Q96KT7 338 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 UGT2B28Q9BY64 529 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ASPSCR1Q9BZE9 553 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TRIM4Q9C037 500 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TGIF2Q9GZN2 237 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 RNPEPL1Q9HAU8 725 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 S100A14Q9HCY8 104 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 ANGPTL2Q9UKU9 493 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 C19orf53Q9UNZ5 99 aaPredicted RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 ZNF451Q9Y4E5 1061 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 TMEM184BQ9Y519 407 aaPredicted RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
USP3-219ENST00000561326 RIF1Q5UIP0 2472 aaKnown RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 COL27A1Q8IZC6 1860 aaPredicted RBP9.66□□□□□ -0.86
USP3-219ENST00000561326 MUC6Q6W4X9 2439 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 TCRBV3S1A0A5B6 114 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 PROB1E7EW31 1015 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 UPK1AO00322 258 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 GDF9O60383 454 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 COQ9O75208 318 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 TNFRSF21O75509 655 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 CDC123O75794 336 aaPredicted RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 KRT36O76013 467 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 BAG2O95816 211 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ONECUT2O95948 504 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 MT-CO3P00414 261 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms