RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 WIPI1Q5MNZ9 446 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 DGAT2L6Q6ZPD8 337 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ANKMY2Q8IV38 441 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PRR22Q8IZ63 422 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 SPATA6LQ8N4H0 392 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ANKRD49Q8WVL7 239 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 RIT1Q92963 219 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ABTB1Q969K4 478 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ARSGQ96EG1 525 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PERPQ96FX8 193 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PBKQ96KB5 322 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 GNRHR2Q96P88 292 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PELOQ9BRX2 385 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 WDR83Q9BRX9 315 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 TMEM79Q9BSE2 394 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 MS4A8Q9BY19 250 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 UGT2B28Q9BY64 529 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PRDM14Q9GZV8 571 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 EHD1Q9H4M9 534 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PROK2Q9HC23 129 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 SH2D2AQ9NP31 389 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 TEX10Q9NXF1 929 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 GALNT8Q9NY28 637 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PHF11Q9UIL8 331 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF490Q9ULM2 529 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PSAT1Q9Y617 370 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 CD8B2A6NJW9 211 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 GLOD5A6NK44 160 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TAPBPO15533 448 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TRIM3O75382 744 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 BMP7P18075 431 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 FNTAP49354 379 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 DIO3P55073 304 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TNFRSF17Q02223 184 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 MGAT5Q09328 741 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 BIKQ13323 160 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 SETDB1Q15047 1291 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 EBPQ15125 230 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 NTRK2Q16620 822 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 CYP1B1Q16678 543 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TMEM35AQ53FP2 167 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 EIPR1Q53HC9 387 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 DCST1Q5T197 706 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 C18orf63Q68DL7 685 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 VASNQ6EMK4 673 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 OR4C11Q6IEV9 310 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 SULT1C3Q6IMI6 304 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 MED27Q6P2C8 311 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 POMZP3Q6PJE2 187 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 BRICD5Q6PL45 260 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 CYP20A1Q6UW02 462 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 UBE3DQ7Z6J8 389 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 YTHDF3Q7Z739 585 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 YRDCQ86U90 279 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 GPR180Q86V85 440 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZC3HC1Q86WB0 502 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 KRTAP1-3Q8IUG1 177 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 ST13P4Q8IZP2 240 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 GCNT2Q8N0V5 402 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 C9orf106Q8NAJ2 232 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 SIMC1Q8NDZ2 872 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 RDH11Q8TC12 318 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TANKQ92844 425 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 PIGTQ969N2 578 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 UBE2E3Q969T4 207 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 ISL2Q96A47 359 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 INTS12Q96CB8 462 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 CMTM7Q96FZ5 175 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 COX4I2Q96KJ9 171 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 CCL19Q99731 98 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 BDH2Q9BUT1 245 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 WDR41Q9HAD4 459 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 SNX15Q9NRS6 342 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 MS4A12Q9NXJ0 267 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 C6orf203Q9P0P8 240 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 TXNDC16Q9P2K2 825 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 RNF112Q9ULX5 631 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 PYCARDQ9ULZ3 195 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 C15orf41Q9Y2V0 281 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 ARID1AO14497 2285 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 MED12LQ86YW9 2145 aa9.59□□□□□ -0.87
CDC42BPB-207ENST00000560492 MED12Q93074 2177 aa9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 JMJD1CQ15652 2540 aa9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 DSCAMO60469 2012 aa9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 HEATR5AQ86XA9 2040 aa9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 FN1P02751 2386 aaKnown RBP9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPB-207ENST00000560492 MBD3L3A6NE82 208 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms