RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 HOMEZQ8IX15 550 aa13□□□□□ -0.33
TPM1-223ENST00000560445 PLD6Q8N2A8 252 aaKnown RBP13□□□□□ -0.33
TPM1-223ENST00000560445 LIX1Q8N485 282 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ZNF321PQ8N8H1 164 aa13□□□□□ -0.33
TPM1-223ENST00000560445 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
TPM1-223ENST00000560445 OR52N2Q8NGI0 321 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
TPM1-223ENST00000560445 SELENOMQ8WWX9 145 aa13□□□□□ -0.33
TPM1-223ENST00000560445 PPWD1Q96BP3 646 aaKnown RBP13□□□□□ -0.33
TPM1-223ENST00000560445 LRRC46Q96FV0 321 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ZNF597Q96LX8 424 aa13□□□□□ -0.33
TPM1-223ENST00000560445 CDK15Q96Q40 435 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ZNF717Q9BY31 904 aaPredicted RBP13□□□□□ -0.33
TPM1-223ENST00000560445 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
TPM1-223ENST00000560445 PPCSQ9HAB8 311 aa13□□□□□ -0.33
TPM1-223ENST00000560445 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ZFP64Q9NPA5 681 aa13□□□□□ -0.33
TPM1-223ENST00000560445 DEPPQ9NTK1 212 aa13□□□□□ -0.33
TPM1-223ENST00000560445 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
TPM1-223ENST00000560445 SLC12A4Q9UP95 1085 aa13□□□□□ -0.33
TPM1-223ENST00000560445 PCDHGB3Q9Y5G1 929 aa13□□□□□ -0.33
TPM1-223ENST00000560445 MYOCOSA0A1B0GUC4 107 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 LRRC14BA6NHZ5 514 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 GLOD5A6NK44 160 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 ADAM10O14672 748 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 PDE9AO76083 593 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 KLK1P06870 262 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 GSTA1P08263 222 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 PORP16435 677 aaPredicted RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 CSNK2A2P19784 350 aaPredicted RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 PEX19P40855 299 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 CSTF3Q12996 717 aaKnown RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 RPS6KA2Q15349 733 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 TMEM198Q66K66 360 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 COMMD6Q7Z4G1 85 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 FGD2Q7Z6J4 655 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 SRRM1Q8IYB3 904 aaKnown RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 METTL4Q8N3J2 472 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 RNF175Q8N4F7 328 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 TMEM251Q8N6I4 163 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 OR4F6Q8NGB9 312 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 C14orf79Q96F83 325 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 DOHHQ9BU89 302 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 KCNJ16Q9NPI9 418 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 GIMAP4Q9NUV9 329 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 PSMC3IPQ9P2W1 217 aaPredicted RBP12.99□□□□□ -0.33
TPM1-223ENST00000560445 ZNF780BQ9Y6R6 833 aa12.99□□□□□ -0.33
TPM1-223ENST00000560445 TRGV5A0A0B4J1U4 118 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 A8MT66 165 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ACOX3O15254 700 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 BCAS2O75934 225 aaPredicted RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 CCL3P10147 92 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 CPMP14384 443 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 NAGAP17050 411 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 NT5EP21589 574 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ATP5F1P24539 256 aaPredicted RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 HMOX2P30519 316 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 MAGEA5P43359 124 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 XKP51811 444 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 PKNOX1P55347 436 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 DCAF7P61962 342 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 CLCQ05315 142 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 FUT7Q11130 342 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 NTRK2Q16620 822 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 SPIN4Q56A73 249 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 C3P1Q6ZMU1 363 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 GPRIN3Q6ZVF9 776 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 CLYBLQ8N0X4 340 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 LRRC25Q8N386 305 aaPredicted RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 VWA5B2Q8N398 1253 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 UHMK1Q8TAS1 419 aaKnown RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 ERP27Q96DN0 273 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ZNF382Q96SR6 550 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 MRPL1Q9BYD6 325 aaKnown RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 ZBTB26Q9HCK0 441 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 TUBA8Q9NY65 449 aaPredicted RBP12.98□□□□□ -0.33
TPM1-223ENST00000560445 VPS29Q9UBQ0 182 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 PRODH2Q9UF12 536 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 PCDHA9Q9Y5H5 950 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
TPM1-223ENST00000560445 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 G3V3Y1 287 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ULK1O75385 1050 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 WISP2O76076 250 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 SUPT7LO94864 414 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 NADKO95544 446 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms