RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PACS2Q86VP3 889 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 TP53INP1Q96A56 240 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 ESAMQ96AP7 390 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 TUBA1CQ9BQE3 449 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 EFCAB11Q9BUY7 163 aa18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 PPANQ9NQ55 473 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-214ENST00000560163 NCF1BA6NI72 391 aaPredicted RBP18■□□□□ 0.47
RABGGTA-214ENST00000560163 NCF1CA8MVU1 366 aaPredicted RBP18■□□□□ 0.47
RABGGTA-214ENST00000560163 ACTL6AO96019 429 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 NCF1P14598 390 aaPredicted RBP18■□□□□ 0.47
RABGGTA-214ENST00000560163 FPR1P21462 350 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 PTPN6P29350 595 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 MC3RP41968 323 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 PCYT1AP49585 367 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 TAS2R39P59534 338 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 SLAMF1Q13291 335 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 ZNF267Q14586 743 aaPredicted RBP18■□□□□ 0.47
RABGGTA-214ENST00000560163 AP5B1Q2VPB7 878 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 FBXO48Q5FWF7 155 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 C18orf63Q68DL7 685 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 FRA10AC1Q70Z53 315 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 MED12LQ86YW9 2145 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 TAGAPQ8N103 731 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 PERPQ96FX8 193 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 TMEM41AQ96HV5 264 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 VPS39Q96JC1 886 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 TM9SF2Q99805 663 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 G6PC3Q9BUM1 346 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 PIGMQ9H3S5 423 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 TEX10Q9NXF1 929 aaPredicted RBP18■□□□□ 0.47
RABGGTA-214ENST00000560163 MS4A12Q9NXJ0 267 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 PSAT1Q9Y617 370 aa18■□□□□ 0.47
RABGGTA-214ENST00000560163 WASHC1A8K0Z3 465 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CAPN14A8MX76 684 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CNOT4O95628 575 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CYP4B1P13584 511 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CPA2P48052 419 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 KRTAP1-1Q07627 177 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 LAPTM5Q13571 262 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 TBCCQ15814 346 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 TIGD3Q6B0B8 471 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 OR4C11Q6IEV9 310 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 PLXDC2Q6UX71 529 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 ZNF662Q6ZS27 426 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 ZC3HC1Q86WB0 502 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 FAM83FQ8NEG4 500 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 IGFBPL1Q8WX77 278 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 WNT2BQ93097 391 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 INTS12Q96CB8 462 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 WFIKKN1Q96NZ8 548 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CCL19Q99731 98 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 SORBS1Q9BX66 1292 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 GSX2Q9BZM3 304 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 PHACTR1Q9C0D0 580 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 WWOXQ9NZC7 414 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 DSCAMO60469 2012 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 CHD3Q12873 2000 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 EXPH5Q8NEV8 1989 aa17.99■□□□□ 0.47
RABGGTA-214ENST00000560163 SONP18583 2426 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 C2orf92A0A1B0GVN3 265 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 PRKRAO75569 313 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 TNFSF13O75888 250 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 WISP3O95389 354 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 TGFB1P01137 390 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 GALNSP34059 522 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 SSR2P43308 183 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 MASP1P48740 699 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 HSPA7P48741 367 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 TNFRSF17Q02223 184 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 CBLBQ13191 982 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 CDKL4Q5MAI5 379 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 YRDCQ86U90 279 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 GPR180Q86V85 440 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 LAS2Q8IYD9 372 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 TCAIMQ8N3R3 496 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 RIT1Q92963 219 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 MARK4Q96L34 752 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 CNOT10Q9H9A5 744 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 SNX15Q9NRS6 342 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 CLCF1Q9UBD9 225 aa17.98■□□□□ 0.47
RABGGTA-214ENST00000560163 FAM95CA0A1B0GW59 222 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 SAP18O00422 153 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 SH3BGRLO75368 114 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 STK16O75716 305 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 GPR75O95800 540 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 CRYGSP22914 178 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 PCDH1Q08174 1060 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 FAM27E3Q08E93 113 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 CHIT1Q13231 466 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 CAPRIN1Q14444 709 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 TOMM20Q15388 145 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 PDK4Q16654 411 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 HIST2H2ACQ16777 129 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 PAGE2BQ5JRK9 111 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 DEPDC1Q5TB30 811 aa17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 KHDRBS2Q5VWX1 349 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-214ENST00000560163 STEAP4Q687X5 459 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms