RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 C1orf52Q8N6N3 182 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR2A12Q8NGT7 310 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ASB4Q9Y574 426 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLAMF1Q13291 335 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 UGCGQ16739 394 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 PCGF3Q3KNV8 242 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 GDPD4Q6W3E5 623 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 MMAAQ8IVH4 418 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZBED3Q96IU2 234 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 MSLNLQ96KJ4 702 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR1F2PQ96R84 312 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 UQCC2Q9BRT2 126 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACP6Q9NPH0 428 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 OXSMQ9NWU1 459 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 PCDHGC4Q9Y5F7 938 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 NEMP2A6NFY4 417 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC22A31A6NKX4 558 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 HK3P52790 923 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 IRF9Q00978 393 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCDC74AQ96AQ1 378 aa13.29□□□□□ -0.28
CSPG4P12-202ENST00000559989 GPR137BO60478 399 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 GLSO94925 669 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 KNG1P01042 644 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 DPEP1P16444 411 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCL23P55773 120 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 KCNC4Q03721 635 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ABHD18Q0P651 414 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 BANPQ8N9N5 519 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA0513O60268 411 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 RHCEP18577 417 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SCAPQ12770 1279 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 UGT3A2Q3SY77 523 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 TMEM151BQ8IW70 566 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 TMEM151AQ8N4L1 468 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PPP1R35Q8TAP8 253 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 FNDC9Q8TBE3 224 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC2A12Q8TD20 617 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 DDIT4LQ96D03 193 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ADAMTS10Q9H324 1103 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 FANCGO15287 622 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PTTG1O95997 202 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ATP1B2P14415 290 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 CKMT2P17540 419 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PTPN2P17706 415 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBE2KP61086 200 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SNRPD2P62316 118 aaKnown RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 NKX3-2P78367 333 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 HYAL2Q12891 473 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 TMEM173Q86WV6 379 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR4K15Q8NH41 348 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC22A14Q9Y267 594 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 AGAP14A8MT82 685 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 TISP43B9A030 160 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 RDH16O75452 317 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 GAAP10253 952 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 C2orf15Q8WU43 125 aaKnown RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 BIRC7Q96CA5 298 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCDC74BQ96LY2 380 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARAFP10398 606 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 CLVS2Q5SYC1 327 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA1211LQ6NV74 962 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PRR18Q8N4B5 295 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 HAS3O00219 553 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 GALEQ14376 348 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 RTL6Q6ICC9 239 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 FUT10Q6P4F1 479 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 FBXL20Q96IG2 436 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PLEKHJ1Q9NW61 149 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF230Q9UIE0 474 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 SARDHQ9UL12 918 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 UNC13BO14795 1591 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
CSPG4P12-202ENST00000559989 A0A1W2PP18 115 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 AGPAT2O15120 278 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 CKMT1AP12532 417 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 POU3F4P49335 361 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 RAB8AP61006 207 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 PCK2Q16822 640 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA0930Q6ICG6 404 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 SSX9Q7RTT3 188 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 WDR20Q8TBZ3 569 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 SH3YL1Q96HL8 342 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 ASB3Q9Y575 518 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 HPRP00739 348 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms