RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
BMP4-208ENST00000559642 SH3BGRL2Q9UJC5 107 aa11.93□□□□□ -0.5
BMP4-208ENST00000559642 RAB21Q9UL25 225 aa11.93□□□□□ -0.5
BMP4-208ENST00000559642 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
BMP4-208ENST00000559642 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
BMP4-208ENST00000559642 PTPN13Q12923 2485 aa11.93□□□□□ -0.5
BMP4-208ENST00000559642 EXPH5Q8NEV8 1989 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 CYSRT1A8MQ03 144 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 TRIM13O60858 407 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 CHRNGP07510 517 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 STSP08842 583 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 CCL3P10147 92 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
BMP4-208ENST00000559642 GALNSP34059 522 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
BMP4-208ENST00000559642 NAA20P61599 178 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 TRA2BP62995 288 aaKnown RBP11.92□□□□□ -0.5
BMP4-208ENST00000559642 IMPG1Q17R60 797 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 MPEG1Q2M385 716 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 PIGGQ5H8A4 983 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 FAM111BQ6SJ93 734 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 OPN5Q6U736 354 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 LYPD8Q6UX82 237 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 RTL4Q6ZR62 310 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 ZCCHC23Q6ZST2 131 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 FJX1Q86VR8 437 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 ADCY4Q8NFM4 1077 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 SLC22A8Q8TCC7 542 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 TCP10LQ8TDR4 215 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 C16orf78Q8WTQ4 265 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 CNRIP1Q96F85 164 aaPredicted RBP11.92□□□□□ -0.5
BMP4-208ENST00000559642 SMC6Q96SB8 1091 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 BRINP2Q9C0B6 783 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 PFDN4Q9NQP4 134 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 UTS2RQ9UKP6 389 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 DLGAP4Q9Y2H0 992 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 POLR3HQ9Y535 204 aaPredicted RBP11.92□□□□□ -0.5
BMP4-208ENST00000559642 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
BMP4-208ENST00000559642 TRGV8A0A0C4DH27 118 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 SERTM1A2A2V5 107 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 OR6C76A6NM76 312 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 FAM166BA8MTA8 275 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 TMEM233B4DJY2 109 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 H3BQF6 201 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 KLRC4-KLRK1H3BQV0 150 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 TFECO14948 347 aaPredicted RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 HS6ST1O60243 411 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 LRATO95237 230 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 ANXA4P09525 319 aaPredicted RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 UROSP10746 265 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 CSNK2A2P19784 350 aaPredicted RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 FUT7Q11130 342 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 DUSP8Q13202 625 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 EXOSC7Q15024 291 aaKnown RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 VWA5B2Q8N398 1253 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 ZNF615Q8N8J6 731 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 ZNF441Q8N8Z8 693 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 POGLUT1Q8NBL1 392 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 OR2M7Q8NG81 312 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 EXOSC8Q96B26 276 aaKnown RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
BMP4-208ENST00000559642 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 ZNF681Q96N22 645 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 OR10A5Q9H207 317 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 MAT2BQ9NZL9 334 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 DTX4Q9Y2E6 619 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 POLEQ07864 2286 aa11.91□□□□□ -0.5
BMP4-208ENST00000559642 HECTD1Q9ULT8 2610 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 LRRK2Q5S007 2527 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 AZIN1O14977 448 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 ASNA1O43681 348 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 CDC40O60508 579 aaKnown RBP eCLIP11.9□□□□□ -0.59e-8■■■■□ 20.8
BMP4-208ENST00000559642 SLC19A2O60779 497 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 ZG16O60844 167 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 RSL1D1O76021 490 aaKnown RBP11.9□□□□□ -0.5
BMP4-208ENST00000559642 ATP1B1P05026 303 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 PCSK2P16519 638 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 S1PR1P21453 382 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 SOX18P35713 384 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 NR0B1P51843 470 aaKnown RBP11.9□□□□□ -0.5
BMP4-208ENST00000559642 MRPS35P82673 323 aaKnown RBP11.9□□□□□ -0.5
BMP4-208ENST00000559642 PLGLB1Q02325 96 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 RBPJQ06330 500 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 MGAT2Q10469 447 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 NNATQ16517 81 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 C3AR1Q16581 482 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 PRICKLE4Q2TBC4 344 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
BMP4-208ENST00000559642 PRAMEF20Q5VT98 475 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 GALNT18Q6P9A2 607 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 TRIM46Q7Z4K8 759 aa11.9□□□□□ -0.5
BMP4-208ENST00000559642 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms