RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SENP5Q96HI0 755 aaPredicted RBP20.19■□□□□ 0.82
SNX1-206ENST00000559389 AMDHD1Q96NU7 426 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 TMEM120AQ9BXJ8 343 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 GLIPR2Q9H4G4 154 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 ATAD3AQ9NVI7 634 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 PCDHGA9Q9Y5G4 932 aaKnown RBP20.19■□□□□ 0.82
SNX1-206ENST00000559389 TRBV11-1A0A0K0K1C0 115 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 A6NL46 340 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 MKRN2OSH3BPM6 223 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 ERVH48-1M5A8F1 160 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 CLPSP04118 112 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 LAMP1P11279 417 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 MPIP34949 423 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 CLCN2P51788 898 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 NCBP2P52298 156 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNX1-206ENST00000559389 CLNS1AP54105 237 aaKnown RBP20.18■□□□□ 0.82
SNX1-206ENST00000559389 UFM1P61960 85 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 MGAT2Q10469 447 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 FUT7Q11130 342 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 MAP4K2Q12851 820 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 ZNF267Q14586 743 aaPredicted RBP20.18■□□□□ 0.82
SNX1-206ENST00000559389 CPTPQ5TA50 214 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 TEX37Q96LM6 180 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 PRPF18Q99633 342 aaKnown RBP20.18■□□□□ 0.82
SNX1-206ENST00000559389 NUDT9Q9BW91 350 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 ADNPQ9H2P0 1102 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 CLMPQ9H6B4 373 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 ACSS1Q9NUB1 689 aaPredicted RBP20.18■□□□□ 0.82
SNX1-206ENST00000559389 KLHL14Q9P2G3 628 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 COPS7AQ9UBW8 275 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 ZNF639Q9UID6 485 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 G3BP2Q9UN86 482 aaKnown RBP20.18■□□□□ 0.82
SNX1-206ENST00000559389 LHX6Q9UPM6 363 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 MED13Q9UHV7 2174 aa20.18■□□□□ 0.82
SNX1-206ENST00000559389 FAM87AP0C7U9 286 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 SOX11P35716 441 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 SEC24CP53992 1094 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 NME5P56597 212 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 KCNAB2Q13303 367 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 RAPSNQ13702 412 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 DPY19L1Q2PZI1 675 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 H3F3CQ6NXT2 135 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 FAM111BQ6SJ93 734 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 NATD1Q8N6N6 113 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 ADCY4Q8NFM4 1077 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 ZFP28Q8NHY6 868 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 ZBED6CLQ96FA7 236 aaPredicted RBP20.17■□□□□ 0.82
SNX1-206ENST00000559389 ARHGAP9Q9BRR9 750 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 SLC25A23Q9BV35 468 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 BHLHE41Q9C0J9 482 aaPredicted RBP20.17■□□□□ 0.82
SNX1-206ENST00000559389 ZNF552Q9H707 407 aaPredicted RBP20.17■□□□□ 0.82
SNX1-206ENST00000559389 ZIM2Q9NZV7 527 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 TUBD1Q9UJT1 453 aa20.17■□□□□ 0.82
SNX1-206ENST00000559389 CFAP47Q6ZTR5 3102 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 CPAMD8Q8IZJ3 1885 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SLITRK5O94991 958 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 IFI6P09912 130 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 S1PR1P21453 382 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 IL12AP29459 219 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SSTR4P31391 388 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 IRX1P78414 480 aaPredicted RBP20.16■□□□□ 0.82
SNX1-206ENST00000559389 MRPS35P82673 323 aaKnown RBP20.16■□□□□ 0.82
SNX1-206ENST00000559389 RPS6KA2Q15349 733 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 CRB2Q5IJ48 1285 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 MIER2Q8N344 545 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SLC5A8Q8N695 610 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SIRT6Q8N6T7 355 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 OR8J2Q8NGG1 315 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 ERP27Q96DN0 273 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 RILPQ96NA2 401 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SMAD5Q99717 465 aaKnown RBP20.16■□□□□ 0.82
SNX1-206ENST00000559389 DUSP26Q9BV47 211 aa20.16■□□□□ 0.82
SNX1-206ENST00000559389 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX1-206ENST00000559389 COPG1Q9Y678 874 aaKnown RBP20.16■□□□□ 0.82
SNX1-206ENST00000559389 C9JVG2 144 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 PRKNO60260 465 aaPredicted RBP20.15■□□□□ 0.82
SNX1-206ENST00000559389 CBX7O95931 251 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 KIR3DL1P43629 444 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 ATP4BP51164 291 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 ARFIP2P53365 341 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 SLC37A1P57057 533 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 STX1BP61266 288 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 HSPB3Q12988 150 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 MLC1Q15049 377 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 SPANXN4Q5MJ08 99 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 B3GNTL1Q67FW5 361 aaPredicted RBP20.15■□□□□ 0.82
SNX1-206ENST00000559389 PCSK4Q6UW60 755 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 HSDL2Q6YN16 418 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 RNF111Q6ZNA4 994 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 ZNF551Q7Z340 670 aaPredicted RBP20.15■□□□□ 0.82
SNX1-206ENST00000559389 C9orf40Q8IXQ3 194 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 LGI4Q8N135 537 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 ARMC10Q8N2F6 343 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 GLB1L3Q8NCI6 653 aaPredicted RBP20.15■□□□□ 0.82
SNX1-206ENST00000559389 OR7G1Q8NGA0 311 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 OR8K3Q8NH51 312 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 C10orf82Q8WW14 230 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 DEFB126Q9BYW3 111 aa20.15■□□□□ 0.82
SNX1-206ENST00000559389 NSRP1Q9H0G5 558 aaKnown RBP20.15■□□□□ 0.82
SNX1-206ENST00000559389 ZNF385DQ9H6B1 395 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms