RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SFT2D3Q587I9 215 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 OR4F3Q6IEY1 312 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 NDUFAF7Q7L592 441 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 RAB43Q86YS6 212 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 TREML1Q86YW5 311 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 CCDC116Q8IYX3 515 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 MORN4Q8NDC4 146 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 OR14A16Q8NHC5 309 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 BCAS4Q8TDM0 211 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 ELP5Q8TE02 316 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 C8orf44Q96CB5 159 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 FBXL20Q96IG2 436 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 PRPF18Q99633 342 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 TUBB6Q9BUF5 446 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 P4HTMQ9NXG6 502 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF223Q9UK11 482 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 GMEB1Q9Y692 573 aa13.82□□□□□ -0.2
SNRPA1-207ENST00000559309 HELZ2Q9BYK8 2649 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 A0A087WV62 115 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF891A8MT65 544 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 C9JVG2 144 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 K7ENP7 123 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 NKX2-8O15522 239 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 HPP00738 406 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 DGKQP52824 942 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 OR4D2P58180 307 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 SLC26A5P58743 744 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 LRRC74AQ0VAA2 488 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 CDC20Q12834 499 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 DUSP8Q13202 625 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 RPS6KA2Q15349 733 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 COQ5Q5HYK3 327 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 INO80CQ6PI98 192 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 DPP10Q8N608 796 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 AMER2Q8N7J2 671 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF615Q8N8J6 731 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF721Q8TF20 911 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 THAP4Q8WY91 577 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 GTF2H4Q92759 462 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 HOXB13Q92826 284 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 PPWD1Q96BP3 646 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 ZBED6CLQ96FA7 236 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 ENTPD4Q9Y227 616 aa13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-207ENST00000559309 TRBV5-3A0A0A0MS03 114 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 IGHV3-20A0A0C4DH32 117 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 MYOCOSA0A1B0GUC4 107 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 A0A1W2PP18 115 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 A0A1W2PRB8 838 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 HRKO00198 91 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 RRP8O43159 456 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 CBX7O95931 251 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 S100A3P33764 101 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 MAP3K8P41279 467 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 HBA1P69905 142 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 Q0VFX4 171 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 LTB4RQ15722 352 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 AGKQ53H12 422 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 LRIF1Q5T3J3 769 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 MFSD4BQ5TF39 518 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 PLAG1Q6DJT9 500 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 FAAH2Q6GMR7 532 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 H3F3CQ6NXT2 135 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 PAPD4Q6PIY7 484 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 TMEM64Q6YI46 380 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF551Q7Z340 670 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 OR2L13Q8N349 312 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 FITM2Q8N6M3 262 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 CCDC197Q8NCU1 140 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 B3GNT7Q8NFL0 401 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 OR1N1Q8NGS0 311 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 OR9A2Q8NGT5 310 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 M1APQ8TC57 530 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ELP4Q96EB1 424 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 DGAT2Q96PD7 388 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ZBTB18Q99592 522 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 LPAR4Q99677 370 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 EPS8L2Q9H6S3 715 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 MMP25Q9NPA2 562 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 PTPRQQ9UMZ3 2332 aa13.8□□□□□ -0.2
SNRPA1-207ENST00000559309 FLNBO75369 2602 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 TMEM200CA6NKL6 621 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 C17orf105B2RV13 164 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 FBP2O00757 339 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 NDUFAB1O14561 156 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms