RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 METTL4Q8N3J2 472 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ADCY4Q8NFM4 1077 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 OR4K14Q8NGD5 310 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 KLHL29Q96CT2 875 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 APIPQ96GX9 242 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 RASL10BQ96S79 203 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ZNF382Q96SR6 550 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 MECRQ9BV79 373 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 ACPTQ9BZG2 426 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 MYOTQ9UBF9 498 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 VPS29Q9UBQ0 182 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 FETUBQ9UGM5 382 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 GRID1Q9ULK0 1009 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 YARS2Q9Y2Z4 477 aaKnown RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
TPM1-216ENST00000558910 USP9YO00507 2555 aaPredicted RBP11.13□□□□□ -0.63
TPM1-216ENST00000558910 HIVEP3Q5T1R4 2406 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 PINLYPA6NC86 204 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 HS6ST1O60243 411 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 PCDH7O60245 1069 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 ZG16O60844 167 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 NME6O75414 186 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 SEMA3DO95025 777 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 MLYCDO95822 493 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 IL3P08700 152 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 CT62P0C5K7 136 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 NR0B1P51843 470 aaKnown RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 TBL3Q12788 808 aaKnown RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 TERF2Q15554 542 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 CCDC153Q494R4 210 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 C6orf163Q5TEZ5 329 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 ZNF324BQ6AW86 544 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 FAM111BQ6SJ93 734 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 LYPD4Q6UWN0 246 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 NCCRP1Q6ZVX7 275 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 PRR22Q8IZ63 422 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 ST13P4Q8IZP2 240 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 FAM13CQ8NE31 585 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 OR5L2Q8NGL0 311 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 AGR3Q8TD06 166 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 AGAP11Q8TF27 550 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 TM4SF18Q96CE8 201 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 L3HYPDHQ96EM0 354 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 MAGED4Q96JG8 741 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 JSRP1Q96MG2 331 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 FRMD6Q96NE9 622 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 C1QTNF3Q9BXJ4 246 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 PARD6BQ9BYG5 372 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 DEFB127Q9H1M4 99 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 TNFRSF12AQ9NP84 129 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 BCAP29Q9UHQ4 241 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 TINAGQ9UJW2 476 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 POLR3HQ9Y535 204 aaPredicted RBP11.12□□□□□ -0.63
TPM1-216ENST00000558910 PTGDR2Q9Y5Y4 395 aa11.12□□□□□ -0.63
TPM1-216ENST00000558910 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 CCL21O00585 134 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 ZNF500O60304 480 aaPredicted RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 CREB1P16220 341 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 ABOP16442 354 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 MSX1P28360 303 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 TRHRP34981 398 aaPredicted RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 CRHR1P34998 444 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 DNASE1L1P49184 302 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 PKNOX1P55347 436 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 IGLV3-21P80748 117 aaPredicted RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 DUSP2Q05923 314 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 ACSM2AQ08AH3 577 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 LTB4RQ15722 352 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 INAQ16352 499 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 C3AR1Q16581 482 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 PRAMEF20Q5VT98 475 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 HLA-DQA1Q5Y7H0 255 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 ACSM2BQ68CK6 577 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 CLEC18BQ6UXF7 455 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 ZCCHC23Q6ZST2 131 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 SH2D5Q6ZV89 423 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 LGI4Q8N135 537 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 PSD4Q8NDX1 1056 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 DNAJB8Q8NHS0 232 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 AENQ8WTP8 325 aaKnown RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 DEPPQ9NTK1 212 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 NMRK1Q9NWW6 199 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 DLGAP4Q9Y2H0 992 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms