RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 HLA-DQA1Q5Y7H0 255 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TIGD3Q6B0B8 471 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 HIST2H2AA3Q6FI13 130 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 DRICH1Q6PGQ1 229 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 LYPD4Q6UWN0 246 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 RNF111Q6ZNA4 994 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SH2D5Q6ZV89 423 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CHMP1BQ7LBR1 199 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 BTLAQ7Z6A9 289 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 MILR1Q7Z6M3 343 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CTAGE6Q86UF2 777 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 C9orf40Q8IXQ3 194 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 OR1J4Q8NGS1 313 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SPPL2AQ8TCT8 520 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 MAIP1Q8WWC4 291 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TANKQ92844 425 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TP53INP1Q96A56 240 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ANKRD9Q96BM1 317 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 REPS1Q96D71 796 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 DTNBP1Q96EV8 351 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 PDLIM5Q96HC4 596 aaKnown RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 TMEM41AQ96HV5 264 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SERPINB12Q96P63 405 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 KCNC2Q96PR1 638 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 GAL3ST4Q96RP7 486 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CSF3RQ99062 836 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 KRT12Q99456 494 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 NDNQ99608 321 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TUBA1CQ9BQE3 449 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 FAM167BQ9BTA0 163 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TBCDQ9BTW9 1192 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 REG4Q9BYZ8 158 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 AMBRA1Q9C0C7 1298 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 UBQLN3Q9H347 655 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 PRM3Q9NNZ6 103 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 PRDM7Q9NQW5 492 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 IARS2Q9NSE4 1012 aaKnown RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 WWOXQ9NZC7 414 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ADGRE2Q9UHX3 823 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 PTBP2Q9UKA9 531 aaKnown RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 ZKSCAN5Q9Y2L8 839 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 C15orf41Q9Y2V0 281 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 VWA7Q9Y334 891 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ATRQ13535 2644 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SONP18583 2426 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 A0A087X1B8 175 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 C2orf92A0A1B0GVN3 265 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 OR6C76A6NM76 312 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 A8MV72 311 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 GNB5O14775 395 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 CBR3O75828 277 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 WDR47O94967 919 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 SOX30O94993 753 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 LRATO95237 230 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 FAM157CP0CG43 387 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 NID1P14543 1247 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 KRT15P19012 456 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 TBXA2RP21731 343 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ATP5A1P25705 553 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 CASP3P42574 277 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 KCNJ1P48048 391 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 KCNJ5P48544 419 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 TMED10P49755 219 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 NR1H2P55055 460 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 NRG3P56975 720 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 FBXW4P57775 412 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 IGLV3-21P80748 117 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 CDKL1Q00532 357 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 PLIN5Q00G26 463 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 TIAL1Q01085 375 aaKnown RBP eCLIP4.71□□□□□ -1.66
SPG11-208ENST00000558155 OCRLQ01968 901 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 KRTAP1-1Q07627 177 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 LAPTM5Q13571 262 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 VEZF1Q14119 521 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 CAPRIN1Q14444 709 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 SLBPQ14493 270 aaKnown RBP eCLIP4.71□□□□□ -1.66
SPG11-208ENST00000558155 ZNF267Q14586 743 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 RPS6KA2Q15349 733 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 BEX5Q5H9J7 111 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 OR2A2Q6IF42 318 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 SLC30A6Q6NXT4 461 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 AAGABQ6PD74 315 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 SLCO4C1Q6ZQN7 724 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 P4HA3Q7Z4N8 544 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ADGRE4PQ86SQ3 457 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 YRDCQ86U90 279 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 GRAMD2AQ8IUY3 354 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 TRIM42Q8IWZ5 723 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 OR4N5Q8IXE1 308 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 RNF10Q8N5U6 811 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 ZNF611Q8N823 705 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ACOT4Q8N9L9 421 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 C2CD4AQ8NCU7 369 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 BBOF1Q8ND07 529 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 MAPK1IP1LQ8NDC0 245 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 MCUQ8NE86 351 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 FAM83FQ8NEG4 500 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms