RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 C2orf92A0A1B0GVN3 265 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 RAD51CO43502 376 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 HPNP05981 417 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 FAM58BPP0C7Q3 252 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 NR2F6P10588 404 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 GDF1P27539 372 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 TIMP3P35625 211 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ASCL1P50553 236 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 SLMAPQ14BN4 828 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 SETDB1Q15047 1291 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ACSF3Q4G176 576 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 TBCELQ5QJ74 424 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 FNDC7Q5VTL7 733 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 TMEM64Q6YI46 380 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 MYLK4Q86YV6 388 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 CENPLQ8N0S6 344 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 CHDHQ8NE62 594 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 WDR20Q8TBZ3 569 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 KCTD4Q8WVF5 259 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 DIO2Q92813 273 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 RNASE6Q93091 150 aaKnown RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 NTNG2Q96CW9 530 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ANGPTL4Q9BY76 406 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 PRDM14Q9GZV8 571 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 UBQLN3Q9H347 655 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ACTR8Q9H981 624 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 CXorf21Q9HAI6 301 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ZNF629Q9UEG4 869 aaPredicted RBP14.62□□□□□ -0.07
SCFD1-224ENST00000557713 ANGPTL3Q9Y5C1 460 aa14.62□□□□□ -0.07
SCFD1-224ENST00000557713 C15orf38-AP3S2A0A0A6YYH1 394 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 A0A1W2PS29 197 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 CCDC189A1A4V9 331 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 LRRC14BA6NHZ5 514 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 A6NNC1 897 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 SYCE1LA8MT33 242 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 DVL2O14641 736 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 TP53I11O14683 189 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 PGRMC2O15173 223 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 UGDHO60701 494 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 ACSL3O95573 720 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 AIFM1O95831 613 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 KLK2P20151 261 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 BMP5P22003 454 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 SSTR4P31391 388 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 WNT3P56703 355 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 FBXW4P57775 412 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 IRF9Q00978 393 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 FUT7Q11130 342 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 DAZAP2Q15038 168 aaPredicted RBP14.61□□□□□ -0.07
SCFD1-224ENST00000557713 RPS6KA2Q15349 733 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 PCBP2Q15366 365 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■■□□ 18.2
SCFD1-224ENST00000557713 CPSF6Q16630 551 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCFD1-224ENST00000557713 FLYWCH1Q4VC44 716 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 BICRALQ6AI39 1079 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 VASNQ6EMK4 673 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 CYP20A1Q6UW02 462 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 MAATS1Q7Z4T9 603 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 CDC20BQ86Y33 519 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 LACC1Q8IV20 430 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 ZNF615Q8N8J6 731 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 L3MBTL4Q8NA19 623 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 SPPL2AQ8TCT8 520 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 FBF1Q8TES7 1133 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 FAM222BQ8WU58 562 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 REPS1Q96D71 796 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 ZNF597Q96LX8 424 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 SECISBP2Q96T21 854 aaKnown RBP14.61□□□□□ -0.07
SCFD1-224ENST00000557713 IPPKQ9H8X2 491 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 SNX15Q9NRS6 342 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 RNF11Q9Y3C5 154 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 NPFFR2Q9Y5X5 522 aa14.61□□□□□ -0.07
SCFD1-224ENST00000557713 PRRC2AP48634 2157 aaKnown RBP14.61□□□□□ -0.07
SCFD1-224ENST00000557713 MAP1AP78559 2803 aaPredicted RBP14.61□□□□□ -0.07
SCFD1-224ENST00000557713 A0A087X1B8 175 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 HMX2A2RU54 273 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 CAPN14A8MX76 684 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 FOXE1O00358 373 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 TRAPPC6AO75865 159 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 SNX4O95219 450 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 C2P06681 752 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 CT62P0C5K7 136 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 HOXB4P17483 251 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 DNASE1P24855 282 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 MAGEA4P43358 317 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 CDK9P50750 372 aaKnown RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 NEK2P51955 445 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 ALDH18A1P54886 795 aaKnown RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 PLTPP55058 493 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 PHEXP78562 749 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 GUCY2DQ02846 1103 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 NAB1Q13506 487 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 CEBPEQ15744 281 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 PFKFB4Q16877 469 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 FAM83EQ2M2I3 478 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 NHSL2Q5HYW2 709 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 NUDT13Q86X67 352 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 SPATA4Q8NEY3 305 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 ADIPOR1Q96A54 375 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 LRRC46Q96FV0 321 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 RMND5BQ96G75 393 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms