RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 LINC00032P0C843 101 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 DDCP20711 480 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 FEN1P39748 380 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 SLC37A1P57057 533 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ABCE1P61221 599 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 FUT7Q11130 342 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 MAP4K2Q12851 820 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 KIAA0040Q15053 153 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 MAPKAPK3Q16644 382 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 PRICKLE4Q2TBC4 344 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 UGT3A2Q3SY77 523 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 OPN5Q6U736 354 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 Q6ZSR9 355 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 MMP21Q8N119 569 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 CYP4Z2PQ8N1L4 340 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 LRRC25Q8N386 305 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 SLC15A4Q8N697 577 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 CDC26Q8NHZ8 85 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 CNRIP1Q96F85 164 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 PPP3R2Q96LZ3 170 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF681Q96N22 645 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 PAIP2Q9BPZ3 127 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 BRINP2Q9C0B6 783 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 TUBB1Q9H4B7 451 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 SLC35C2Q9NQQ7 365 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 KLHL1Q9NR64 748 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 OLAHQ9NV23 265 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ZDHHC2Q9UIJ5 367 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 ERVK-11Q9UQG0 969 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 CFL2Q9Y281 166 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 KLF13Q9Y2Y9 288 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
SLIRP-209ENST00000557342 A0A1W2PS29 197 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 TMEM120BA0PK00 339 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 TMEM233B4DJY2 109 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 KLRC4-KLRK1H3BQV0 150 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 PIP5K1BO14986 540 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 LSM1O15116 133 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 NME2P1O60361 137 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 CT62P0C5K7 136 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 EDN3P14138 238 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 NME2P22392 152 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 MAPK1P28482 360 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ARRB2P32121 409 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 MPIP34949 423 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 SLC1A6P48664 564 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 MAGOHP61326 146 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 RPL38P63173 70 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 STX3Q13277 289 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 MPP2Q14168 576 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 AGBL2Q5U5Z8 902 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 HLA-DQA1Q5Y7H0 255 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 FAM71E1Q6IPT2 247 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 GALNTL5Q7Z4T8 443 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 VWA5B2Q8N398 1253 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ST6GALNAC3Q8NDV1 305 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 OR2T11Q8NH01 316 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF675Q8TD23 568 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 DOK4Q8TEW6 326 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 TP53INP1Q96A56 240 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 EXOSC8Q96B26 276 aaKnown RBP11.57□□□□□ -0.56
SLIRP-209ENST00000557342 TLCD1Q96CP7 247 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 FCRL1Q96LA6 429 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 TAAR6Q96RI8 345 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 GAL3ST4Q96RP7 486 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 WWTR1Q9GZV5 400 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 OR10A5Q9H207 317 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 NKIRAS1Q9NYS0 192 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 MAT2BQ9NZL9 334 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 RAP2CQ9Y3L5 183 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
SLIRP-209ENST00000557342 C2orf92A0A1B0GVN3 265 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ASPDHA6ND91 283 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 BCAS2O75934 225 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-209ENST00000557342 CBX6O95503 412 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 DDX5P17844 614 aaKnown RBP11.56□□□□□ -0.56
SLIRP-209ENST00000557342 BGNP21810 368 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 GNLYP22749 145 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 SSTR4P31391 388 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 SOX3P41225 446 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ASMTP46597 345 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 CEBPEQ15744 281 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms