RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 OR4K3Q96R72 315 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GABARAPL1Q9H0R8 117 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC6A15Q9H2J7 730 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 IGFLR1Q9H665 355 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC28A3Q9HAS3 691 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZSCAN32Q9NX65 697 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 OR6C2Q9NZP2 312 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 LOC285095A0A1B0GVY8 99 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MEIS3P1A6NDR6 274 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ATP6V1G2-DDX39BF2Z307 99 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC16A5O15375 505 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ITGA10O75578 1167 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PRAMEF12O95522 483 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MNDAP41218 407 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 RGRP47804 291 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HK3P52790 923 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ERVK-25P63136 954 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SKP1P63208 163 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 VLDLRP98155 873 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 LMAN2Q12907 356 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 BIKQ13323 160 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GRIN2CQ14957 1233 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 KLHL26Q53HC5 615 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 KDM4DQ6B0I6 523 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PLBD1Q6P4A8 553 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FAM198BQ6UWH4 519 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GJD3Q8N144 294 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 KCT2Q8NC54 265 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 BBS10Q8TAM1 723 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PXYLP1Q8TE99 480 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 C2orf15Q8WU43 125 aaKnown RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CXorf40BQ96DE9 158 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF354BQ96LW1 612 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CDADC1Q9BWV3 514 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLAMF7Q9NQ25 335 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC7A7Q9UM01 511 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PPT2Q9UMR5 302 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 DOCK5Q9H7D0 1870 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 A0A0A6YYJ9 748 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NFKBIEO00221 500 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 AKR7A2O43488 359 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 B3GALT2O43825 422 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SCG5P05408 212 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PEPDP12955 493 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TGM1P22735 817 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PTPN6P29350 595 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CMPK1P30085 196 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 HSD17B12Q53GQ0 312 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CDKL4Q5MAI5 379 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 RTL4Q6ZR62 310 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MSANTD1Q6ZTZ1 278 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 BTN2A1Q7KYR7 527 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 RBM23Q86U06 439 aaKnown RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PDZD3Q86UT5 571 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FOXRED2Q8IWF2 684 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF557Q8N988 423 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 FBXO15Q8NCQ5 510 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 STOML3Q8TAV4 291 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 DYNC2LI1Q8TCX1 351 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SUSD6Q92537 303 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC35B4Q969S0 331 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MNTQ99583 582 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SLC25A18Q9H1K4 315 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF226Q9NYT6 803 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TAS2R3Q9NYW6 316 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ADAMTS5Q9UNA0 930 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PLEKHA6Q9Y2H5 1048 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MED31Q9Y3C7 131 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF670-ZNF695F2Z2N8 137 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 M0R036 132 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CACNB4O00305 520 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GABRPO00591 440 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MMP20O60882 483 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 IGFBP1P08833 259 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF806P0C7X5 589 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF10P21506 573 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CTSOP43234 321 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 MAGEA2P43356 314 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CLCN7P51798 805 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PSPHP78330 225 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SNTA1Q13424 505 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 TBCEQ15813 527 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CTF1Q16619 201 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SWI5Q1ZZU3 235 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 OR2G6Q5TZ20 316 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 GRHL2Q6ISB3 625 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 METTL2BQ6P1Q9 378 aaKnown RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 C22orf39Q6P5X5 142 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PSRC1Q6PGN9 363 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 CRTC1Q6UUV9 634 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NUDT18Q6ZVK8 323 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 DNAJB7Q7Z6W7 309 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-223ENST00000557005 NPAS4Q8IUM7 802 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 BEST4Q8NFU0 473 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 OR52N2Q8NGI0 321 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 SCRN2Q96FV2 425 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 PSKH2Q96QS6 385 aa4.75□□□□□ -1.65
SYNE2-223ENST00000557005 C17orf62Q9BQA9 187 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms