RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CT62P0C5K7 136 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SLC35E2P0CK97 266 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 COL8A1P27658 744 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 TLX1P31314 330 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SOX18P35713 384 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 DCTP40126 519 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 MDH1P40925 334 aaKnown RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 NR0B1P51843 470 aaKnown RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 PER3P56645 1201 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 GNGT1P63211 74 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 LCP2Q13094 533 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 BIKQ13323 160 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 MPP2Q14168 576 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 EBPQ15125 230 aaKnown RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 MPEG1Q2M385 716 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF750Q32MQ0 723 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 IL20RBQ6UXL0 311 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ZYG11AQ6WRX3 759 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 GPRIN3Q6ZVF9 776 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SLC22A9Q8IVM8 553 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF441Q8N8Z8 693 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 OR5L2Q8NGL0 311 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ITLN2Q8WWU7 325 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 MAGED4Q96JG8 741 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ART5Q96L15 291 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 KCNA7Q96RP8 456 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 CNPPD1Q9BV87 410 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 ACPTQ9BZG2 426 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 WWTR1Q9GZV5 400 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 WDR41Q9HAD4 459 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SH2D2AQ9NP31 389 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 TIMMDC1Q9NPL8 285 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SH3BGRL2Q9UJC5 107 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 TINAGQ9UJW2 476 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 CES1P1Q9UKY3 287 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 SNX6Q9UNH7 406 aa9.55□□□□□ -0.88
SHMT2-224ENST00000556737 DIDO1Q9BTC0 2240 aaKnown RBP9.55□□□□□ -0.88
SHMT2-224ENST00000556737 EML6Q6ZMW3 1958 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 UBFD1O14562 309 aaKnown RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 TFECO14948 347 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 HS6ST1O60243 411 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 OR10H2O60403 315 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 PLIN3O60664 434 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 GLSO94925 669 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 MLYCDO95822 493 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 CCL3P10147 92 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 MYL2P10916 166 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 HSD3B1P14060 373 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 HSD3B2P26439 372 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 SSTR4P31391 388 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 SERPINB4P48594 390 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 MAPK12P53778 367 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 FOXA1P55317 472 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 RAE1P78406 368 aaKnown RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ADORA2A-AS1P86434 159 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 DUSP2Q05923 314 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 RBPJQ06330 500 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ASPHQ12797 758 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 DUSP8Q13202 625 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 KRTCAP3Q53RY4 240 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 PIGGQ5H8A4 983 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 CCNYL2Q5T2Q4 361 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF787Q6DD87 383 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 SLC48A1Q6P1K1 146 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 BNC2Q6ZN30 1099 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 RTL4Q6ZR62 310 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 FRMD7Q6ZUT3 714 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 PAGE2Q7Z2X7 111 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 GHDCQ8N2G8 530 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 C1orf52Q8N6N3 182 aaKnown RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 GOLM1Q8NBJ4 401 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 OR2M7Q8NG81 312 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 LRRC8CQ8TDW0 803 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 TM4SF18Q96CE8 201 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 C11orf24Q96F05 449 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 RBM18Q96H35 190 aaKnown RBP9.54□□□□□ -0.88
SHMT2-224ENST00000556737 TNFRSF12AQ9NP84 129 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ADAM21Q9UKJ8 722 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 ERVK-11Q9UQG0 969 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 STK38LQ9Y2H1 464 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 PCDHA9Q9Y5H5 950 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 CRYBG3Q68DQ2 2970 aa9.54□□□□□ -0.88
SHMT2-224ENST00000556737 CELSR2Q9HCU4 2923 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 NCKAP5O14513 1909 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 OR6C76A6NM76 312 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 G3V3Y1 287 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 KLRC4-KLRK1H3BQV0 150 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CCL21O00585 134 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 ADAM10O14672 748 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 DYRK3O43781 588 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 ESRRBO95718 433 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 KRT6AP02538 564 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 KRT6BP04259 564 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms