RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NPC1L1Q9UHC9 1359 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 A0A1B0GU03 582 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 SRRM4A7MD48 611 aaKnown RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 MAPK13O15264 365 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 MFN2O95140 757 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 FCER2P06734 321 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 KRT13P13646 458 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 IFNAR2P48551 515 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 NAPAP54920 295 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 HERVK_113P63132 956 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ERVK-8P63133 956 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 OVGP1Q12889 678 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 FCN2Q15485 313 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 CLPPQ16740 277 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 LIPKQ5VXJ0 399 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 LRRC8BQ6P9F7 803 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 CENPQQ7L2Z9 268 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 TBC1D10CQ8IV04 446 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 CENPLQ8N0S6 344 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 DCLK2Q8N568 766 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 MINDY2Q8NBR6 621 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF485Q8NCK3 441 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ADAD2Q8NCV1 583 aaKnown RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 TRIM58Q8NG06 486 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 OR10T2Q8NGX3 314 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 FBXO30Q8TB52 745 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 FBXO25Q8TCJ0 367 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 LIPHQ8WWY8 451 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 FBXO17Q96EF6 278 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 F2RL3Q96RI0 385 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 USP28Q96RU2 1077 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 JPH2Q9BR39 696 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ERVK-6Q9BXR3 956 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 WDR13Q9H1Z4 485 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 RPAP3Q9H6T3 665 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 DCTPP1Q9H773 170 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 COG4Q9H9E3 785 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ATAD3AQ9NVI7 634 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 RBM28Q9NW13 759 aaKnown RBP3.7□□□□□ -1.82
PRPF39-210ENST00000556718 BAIAP2L1Q9UHR4 511 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 LAMP5Q9UJQ1 280 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 ANGPTL3Q9Y5C1 460 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 GOLGA3Q08378 1498 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 NACADO15069 1562 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 CLIP1P30622 1438 aa3.7□□□□□ -1.82
PRPF39-210ENST00000556718 TONSLQ96HA7 1378 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 NINLQ9Y2I6 1382 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 UQCRHLA0A096LP55 91 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 A0A1B0GWJ7 208 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SH3PXD2BA1X283 911 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ANHXE9PGG2 379 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 PDXKO00764 312 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SH2D1BO14796 132 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TNFSF12O43508 249 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 GMFGO60234 142 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 UQCRHP07919 91 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 FAM200BP0CF97 657 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 PAICSP22234 425 aaKnown RBP3.69□□□□□ -1.82
PRPF39-210ENST00000556718 PRKACGP22612 351 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 DPP4P27487 766 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 AXLP30530 894 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 FCGR2BP31994 310 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-210ENST00000556718 FCGR2CP31995 323 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SOX6P35712 828 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 MMP12P39900 470 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ZFP36L2P47974 494 aaKnown RBP3.69□□□□□ -1.82
PRPF39-210ENST00000556718 NDST1P52848 882 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 CRYBA2P53672 197 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ATP12AP54707 1039 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 KLF5Q13887 457 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-210ENST00000556718 HAGHQ16775 308 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TMEM41BQ5BJD5 291 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 DCAF12Q5T6F0 453 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 PWWP2BQ6NUJ5 590 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SLC25A24Q6NUK1 477 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 STEAP1BQ6NZ63 245 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 LCLAT1Q6UWP7 414 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 DPY19L2P2Q6ZN68 376 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 PPP1R42Q7Z4L9 355 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 P4HA3Q7Z4N8 544 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 GPBP1Q86WP2 473 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 WDR49Q8IV35 697 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TBC1D21Q8IYX1 336 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 OR10G7Q8NGN6 311 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ATP8B4Q8TF62 1192 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 RAB7BQ96AH8 199 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TXN2Q99757 166 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 TSPY26PQ9H489 355 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 CHMP5Q9NZZ3 219 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 MIOXQ9UGB7 285 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SNX6Q9UNH7 406 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 DUSP12Q9UNI6 340 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SLC9A8Q9Y2E8 581 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 SLC6A5Q9Y345 797 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF175Q9Y473 711 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 MFHAS1Q9Y4C4 1052 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 ATG4BQ9Y4P1 393 aa3.69□□□□□ -1.82
PRPF39-210ENST00000556718 DDX49Q9Y6V7 483 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms