RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PHF3Q92576 2039 aaKnown RBP20.79■□□□□ 0.92
ACTN1-220ENST00000556433 C2orf92A0A1B0GVN3 265 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 A0A1W2PS29 197 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 FOXO6A8MYZ6 492 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 STX16-NPEPL1H3BU86 382 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 STX16O14662 325 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 SMIM24O75264 130 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 LRATO95237 230 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 CLPSP04118 112 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 KLK1P06870 262 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 MSX1P28360 303 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 SSTR4P31391 388 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 MAGEA12P43365 314 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 SERPINB9P50453 376 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 OR4K14Q8NGD5 310 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 IFT81Q8WYA0 676 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 ISL2Q96A47 359 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 NSUN5Q96P11 429 aaKnown RBP20.79■□□□□ 0.92
ACTN1-220ENST00000556433 TSPYL1Q9H0U9 437 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 ZNF703Q9H7S9 590 aaPredicted RBP20.79■□□□□ 0.92
ACTN1-220ENST00000556433 CXorf21Q9HAI6 301 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 ZBTB26Q9HCK0 441 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 AHSPQ9NZD4 102 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 XPR1Q9UBH6 696 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 PCTPQ9UKL6 214 aa20.79■□□□□ 0.92
ACTN1-220ENST00000556433 CNOT11Q9UKZ1 510 aaKnown RBP20.79■□□□□ 0.92
ACTN1-220ENST00000556433 WDR1O75083 606 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 ZFP36L2P47974 494 aaKnown RBP20.78■□□□□ 0.92
ACTN1-220ENST00000556433 IFT88Q13099 833 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 NTRK2Q16620 822 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 WHAMMP3Q1A5X7 153 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 TSNAXIP1Q2TAA8 658 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 SGO1Q5FBB7 561 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 C1orf185Q5T7R7 199 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 HLA-DQA1Q5Y7H0 255 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 TMEM64Q6YI46 380 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 TAOK1Q7L7X3 1001 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 MILR1Q7Z6M3 343 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 DMRTC2Q8IXT2 367 aaPredicted RBP20.78■□□□□ 0.92
ACTN1-220ENST00000556433 TP53INP1Q96A56 240 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 PAFAH2Q99487 392 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 DOHHQ9BU89 302 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 SPRR3Q9UBC9 169 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 DMGDHQ9UI17 866 aaKnown RBP20.78■□□□□ 0.92
ACTN1-220ENST00000556433 ADAM29Q9UKF5 820 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 ADGRG4Q8IZF6 3080 aa20.78■□□□□ 0.92
ACTN1-220ENST00000556433 A0A0G2JNJ9 132 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 LRRC3CA6NJW4 275 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 CAPN14A8MX76 684 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 POC1B-GALNT4F8VUJ3 575 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 TP53I11O14683 189 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 HOXD4P09016 255 aaPredicted RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 COL6A2P12110 1019 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 ENDOUP21128 410 aaKnown RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 XKP51811 444 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 TRAF3Q13114 568 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 CCNYL2Q5T2Q4 361 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 C10orf62Q5T681 223 aaPredicted RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 PAGE2Q7Z2X7 111 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 GALNT12Q8IXK2 581 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 LRRC25Q8N386 305 aaPredicted RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 MMGT1Q8N4V1 131 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 ZNF441Q8N8Z8 693 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 DIO2Q92813 273 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 MRPL1Q9BYD6 325 aaKnown RBP20.77■□□□□ 0.92
ACTN1-220ENST00000556433 ELOVL6Q9H5J4 265 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 ACKR4Q9NPB9 350 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 QPCTLQ9NXS2 382 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 Q9UFV3 132 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 NINQ8N4C6 2090 aa20.77■□□□□ 0.92
ACTN1-220ENST00000556433 KRT38O76015 456 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 CT62P0C5K7 136 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 GABRA1P14867 456 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 NT5EP21589 574 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 FUT7Q11130 342 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 TMEM198Q66K66 360 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 CDH24Q86UP0 819 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 LIX1Q8N485 282 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 OR4F6Q8NGB9 312 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 UHMK1Q8TAS1 419 aaKnown RBP20.76■□□□□ 0.91
ACTN1-220ENST00000556433 MRPL57Q9BQC6 102 aaKnown RBP20.76■□□□□ 0.91
ACTN1-220ENST00000556433 OR10A5Q9H207 317 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 SLC6A15Q9H2J7 730 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 B4GALT7Q9UBV7 327 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 NPFFR2Q9Y5X5 522 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 CSMD2Q7Z408 3487 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 HCFC1P51610 2035 aa20.76■□□□□ 0.91
ACTN1-220ENST00000556433 ANKRD33BA6NCL7 494 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 TRIM49D1C9J1S8 452 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 ADH7P40394 386 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 TRPC1P48995 793 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 FBXW4P57775 412 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 GGTA1PQ4G0N0 100 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 TBCELQ5QJ74 424 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 C6orf163Q5TEZ5 329 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 RPS27LQ71UM5 84 aaKnown RBP20.75■□□□□ 0.91
ACTN1-220ENST00000556433 LIX1LQ8IVB5 337 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 CLYBLQ8N0X4 340 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 METTL4Q8N3J2 472 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms